Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR1203-201ENST00000408812 85 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC28A1O00337 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 CLNS1AP1-201ENST00000435954 682 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC104339.1-201ENST00000465478 348 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 RPS3AP15-201ENST00000483874 781 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC28A1O00337 SEPT10P1-201ENST00000517342 1162 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC027369.2-201ENST00000528030 440 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC008126.1-201ENST00000549019 480 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC28A1O00337 HSPE1P2-201ENST00000554777 306 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
SLC28A1O00337 LINC00556-201ENST00000569603 412 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC027216.1-201ENST00000577726 685 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC067838.1-201ENST00000606064 577 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AL359091.2-201ENST00000609303 556 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC010632.3-201ENST00000611377 369 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC28A1O00337 AL591926.1-201ENST00000620542 217 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AC024884.1-201ENST00000620583 399 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC28A1O00337 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC007342.9-201ENST00000623877 1385 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC28A1O00337 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SLC28A1O00337 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC018809.2-201ENST00000602436 3823 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 AL359715.3-201ENST00000569267 2123 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 AP001029.2-203ENST00000589795 4910 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 AC245100.2-201ENST00000454544 1679 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC28A1O00337 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC28A1O00337 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC28A1O00337 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC28A1O00337 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC28A1O00337 RNU1-150P-201ENST00000362491 162 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 RNA5SP431-201ENST00000410312 120 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SLC28A1O00337 REREP1Y-201ENST00000422655 198 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC28A1O00337 AL136231.1-201ENST00000429407 730 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC28A1O00337 REREP2Y-201ENST00000439103 200 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 CBX1P2-201ENST00000453841 458 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 ACA64.1-201ENST00000459171 127 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC28A1O00337 AC025458.1-201ENST00000506046 166 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 AC091912.1-201ENST00000511351 248 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC28A1O00337 TRIM51DP-201ENST00000529746 596 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.37□□□□□ -1.55
SLC28A1O00337 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC28A1O00337 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SLC28A1O00337 OR8G3P-202ENST00000641572 1255 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC28A1O00337 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SLC28A1O00337 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC28A1O00337 MTND5P23-201ENST00000430812 1655 ntBASIC5.37□□□□□ -1.55
SLC28A1O00337 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC28A1O00337 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC144833.1-201ENST00000567953 4089 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC28A1O00337 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms