Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 AC115085.1-201ENST00000588924 229 ntBASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 ZNF92P3-201ENST00000596594 954 ntBASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 AL096803.3-201ENST00000609032 532 ntBASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 AC027506.1-201ENST00000621395 198 ntBASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 BMS1P21-201ENST00000634565 365 ntBASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 AL031119.1-201ENST00000404707 1879 ntBASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 AC007996.1-201ENST00000620414 2821 ntBASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB1P1B2RPK0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 MAPK10-328ENST00000641553 4009 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 RNA5SP375-201ENST00000362975 119 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 MIR142-201ENST00000384835 87 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 RPSAP44-201ENST00000406712 884 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 SOD1P1-201ENST00000407803 440 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 RN7SKP108-201ENST00000411367 328 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 NMD3P2-201ENST00000421815 761 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 CR848007.2-201ENST00000424918 787 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 FO393419.3-201ENST00000428741 282 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 SDC4P-201ENST00000453285 601 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC018475.1-201ENST00000478358 465 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 RN7SL776P-201ENST00000493390 268 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 RN7SL591P-201ENST00000496150 292 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC018645.1-201ENST00000505003 109 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 PDCD5P1-201ENST00000543528 309 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC133552.4-201ENST00000576103 676 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 MIR4716-201ENST00000579628 84 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 SYPL1P2-201ENST00000582878 727 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 MIR4660-201ENST00000583549 74 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 SNORA74.4-201ENST00000607595 199 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 MIR7973-1-201ENST00000614683 76 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC104307.1-201ENST00000616142 196 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC000123.2-201ENST00000623124 461 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AP006248.2-201ENST00000623309 592 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 AC005514.1-201ENST00000623521 208 ntBASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB1P1B2RPK0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 PWAR1-201ENST00000624188 2414 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 SNORA70.6-201ENST00000383934 134 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 RPL12P23-201ENST00000405880 490 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 MTCO3P4-201ENST00000419236 787 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 AL358176.3-201ENST00000420757 454 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 AC096775.1-201ENST00000437724 448 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 RPS10P18-201ENST00000442662 495 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 RPL6P24-201ENST00000445338 864 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 TPTE2P6-202ENST00000445572 1007 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 MTND2P8-201ENST00000450555 1025 ntBASIC6.04□□□□□ -1.44
HMGB1P1B2RPK0 CBX1P2-201ENST00000453841 458 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms