Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 LRRC37A17P-201ENST00000570311 4693 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AL390195.2-201ENST00000564771 2023 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 Y_RNA.86-201ENST00000363020 111 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 RN7SKP171-201ENST00000364417 303 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 SUMO2P13-201ENST00000403109 272 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 RPL10P10-201ENST00000403509 664 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AL512422.1-201ENST00000407033 553 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 RN7SKP205-201ENST00000410999 307 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AL593856.1-201ENST00000419949 805 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 GPM6BP2-201ENST00000432046 144 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AL954705.1-201ENST00000435277 559 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 GPM6BP1-201ENST00000446387 144 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 RN7SL325P-201ENST00000460434 283 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 RN7SL153P-201ENST00000486501 292 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 RPL39P36-201ENST00000490784 156 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC010486.1-201ENST00000511793 424 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 MTCO1P30-201ENST00000515244 580 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 OR5AP1P-201ENST00000529730 940 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 STX8-209ENST00000574431 731 ntTSL 3 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 BNIP3P8-201ENST00000597863 560 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AP001521.2-201ENST00000608772 546 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AP005137.2-201ENST00000609238 400 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AP001506.1-201ENST00000615444 211 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AC027807.2-201ENST00000616099 408 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 7SK.10-201ENST00000621414 298 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 VN2R3P-201ENST00000422626 1412 ntBASIC9.95□□□□□ -0.82
PHF8Q9UPP1 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
PHF8Q9UPP1 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC092999.1-201ENST00000624004 1924 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC095038.1-201ENST00000429248 1591 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 C1D-202ENST00000407324 1379 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 PPBPP2-201ENST00000513150 1362 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 OR2M1P-201ENST00000318104 951 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 RNU5E-5P-201ENST00000365379 116 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 SSX3-202ENST00000376893 800 ntTSL 2 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 OR4K12P-201ENST00000406538 961 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 LARP1P1-201ENST00000407692 292 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AMD1P2-201ENST00000412936 992 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 RPL7AP51-201ENST00000422016 760 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 NUP35P1-201ENST00000422734 947 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 SPATA20P1-201ENST00000423089 438 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 RN7SL393P-201ENST00000463588 296 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC130509.1-201ENST00000464158 433 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 NDUFB4P2-201ENST00000509515 391 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 APOBEC3AP1-201ENST00000511396 287 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC106800.2-201ENST00000514009 1103 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 RN7SKP11-201ENST00000517018 287 ntBASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 RPS11-202ENST00000594493 575 ntTSL 3 BASIC9.94□□□□□ -0.82
PHF8Q9UPP1 AC011500.1-201ENST00000601963 469 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms