Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC106872.4-201ENST00000510050 523 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC079395.2-201ENST00000610982 737 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC010632.3-201ENST00000611377 369 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 MIR4302-201ENST00000638058 60 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CISHQ9NSE2 ABCA11P-202ENST00000504019 2110 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CISHQ9NSE2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 RNU1-77P-201ENST00000390868 162 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 AC007386.1-201ENST00000455212 582 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 RPL7P45-201ENST00000455851 743 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 OR4A43P-201ENST00000532938 908 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CISHQ9NSE2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 RN7SL356P-201ENST00000582228 248 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 AC108738.1-201ENST00000603703 237 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 AC244107.2-201ENST00000611773 76 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 AC005840.5-201ENST00000619166 599 ntBASIC5.77□□□□□ -1.49
CISHQ9NSE2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CISHQ9NSE2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CISHQ9NSE2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CISHQ9NSE2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CISHQ9NSE2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC027279.1-201ENST00000568885 4284 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 OR4K12P-201ENST00000406538 961 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 DSTNP5-201ENST00000427921 523 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 TAAR4P-201ENST00000454843 1039 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC108693.1-201ENST00000496068 432 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC005341.1-201ENST00000571086 708 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 RBM22P1-201ENST00000578589 1214 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 MIR7853-201ENST00000584820 132 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.76□□□□□ -1.49
CISHQ9NSE2 AC078880.4-201ENST00000617627 1749 ntBASIC5.76□□□□□ -1.49
CISHQ9NSE2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CISHQ9NSE2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 CASC19-260ENST00000641828 2001 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms