Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 Z83820.1-201ENST00000456978 1499 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 RNU6-252P-201ENST00000363232 107 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 RNA5SP85-201ENST00000365378 119 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 RNU6-796P-201ENST00000391086 107 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AL133260.1-201ENST00000405720 405 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AL445183.3-201ENST00000414168 502 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC107081.1-201ENST00000414975 361 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 DEFB130D-201ENST00000426866 237 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AL117351.1-201ENST00000438864 766 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AP000916.1-201ENST00000533869 835 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 CYB5AP5-201ENST00000549779 389 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 DPPA3P2-202ENST00000557188 1219 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 NPM1P42-201ENST00000560329 862 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC027455.1-201ENST00000574104 594 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 MIR4732-201ENST00000581873 76 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC008536.1-201ENST00000602872 669 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC068726.1-201ENST00000610993 341 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AC015722.2-201ENST00000622210 551 ntBASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
AMBRA1Q9C0C7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 RN7SKP15-201ENST00000364742 309 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SNORA64.3-201ENST00000365647 134 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 DHFRP2-201ENST00000414224 547 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AL158825.1-201ENST00000414735 521 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 BTF3P9-201ENST00000418784 283 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 RPL7P34-201ENST00000433316 712 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 RPSAP40-201ENST00000442343 891 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC112187.1-201ENST00000455837 479 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC092691.2-201ENST00000461787 803 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC073594.1-201ENST00000462065 364 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 MTCO3P35-201ENST00000485582 781 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC010343.2-201ENST00000510162 224 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC133963.2-201ENST00000513686 578 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 OR10V3P-201ENST00000525712 725 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms