Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
IFT140Q96RY7 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
IFT140Q96RY7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AC114774.1-201ENST00000507410 1770 ntBASIC8.85□□□□□ -0.99
IFT140Q96RY7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC8.85□□□□□ -0.99
IFT140Q96RY7 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.85□□□□□ -0.99
IFT140Q96RY7 AC058823.1-201ENST00000485315 474 ntBASIC8.85□□□□□ -0.99
IFT140Q96RY7 RPS17P5-201ENST00000498293 408 ntBASIC8.85□□□□□ -0.99
IFT140Q96RY7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AL590392.1-201ENST00000604960 446 ntBASIC8.85□□□□□ -0.99
IFT140Q96RY7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
IFT140Q96RY7 AL133243.4-201ENST00000623116 3109 ntBASIC8.85□□□□□ -0.99
IFT140Q96RY7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
IFT140Q96RY7 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 RPL17P36-201ENST00000420302 549 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 AC009480.2-201ENST00000422916 432 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 CHIAP3-201ENST00000423668 1133 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 AC004975.1-201ENST00000428733 208 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 AC112498.1-201ENST00000444401 332 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 COX6B1P5-201ENST00000509843 249 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
IFT140Q96RY7 AC006338.2-201ENST00000616864 791 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
IFT140Q96RY7 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 EEF1A1P36-201ENST00000427807 1351 ntBASIC8.84□□□□□ -0.99
IFT140Q96RY7 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
IFT140Q96RY7 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
IFT140Q96RY7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
IFT140Q96RY7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
IFT140Q96RY7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC8.83□□□□□ -1
IFT140Q96RY7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.83□□□□□ -1
IFT140Q96RY7 CRIP1P1-201ENST00000427567 185 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC8.83□□□□□ -1
IFT140Q96RY7 AC092754.1-201ENST00000472975 479 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 OR7E128P-201ENST00000532736 1024 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 MIR3160-1-201ENST00000577972 85 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.83□□□□□ -1
IFT140Q96RY7 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.83□□□□□ -1
IFT140Q96RY7 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
IFT140Q96RY7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 Z98755.1-201ENST00000407015 1384 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.83□□□□□ -1
IFT140Q96RY7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 AC022819.1-201ENST00000563495 3910 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
IFT140Q96RY7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.83□□□□□ -1
IFT140Q96RY7 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.83□□□□□ -1
IFT140Q96RY7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.83□□□□□ -1
IFT140Q96RY7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
IFT140Q96RY7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 MIR600-201ENST00000385007 98 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 AC093414.1-201ENST00000434712 514 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC8.83□□□□□ -1
IFT140Q96RY7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC8.83□□□□□ -1
IFT140Q96RY7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.83□□□□□ -1
IFT140Q96RY7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.83□□□□□ -1
IFT140Q96RY7 AL445687.2-201ENST00000458156 728 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 AC093720.1-201ENST00000505681 714 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.83□□□□□ -1
IFT140Q96RY7 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.83□□□□□ -1
IFT140Q96RY7 AC137627.1-201ENST00000545761 289 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 AL109618.2-201ENST00000605527 211 ntBASIC8.83□□□□□ -1
IFT140Q96RY7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
IFT140Q96RY7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.82□□□□□ -1
IFT140Q96RY7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.82□□□□□ -1
IFT140Q96RY7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
IFT140Q96RY7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms