Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC130304.1-201ENST00000622942 2385 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AL161756.3-201ENST00000641216 2071 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 PARP4P2-201ENST00000446672 3326 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 SELENOWP1-201ENST00000322792 252 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 RN7SKP187-201ENST00000365536 330 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AL353692.2-201ENST00000407054 335 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 RPL35AP3-201ENST00000414680 288 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 RPS4XP5-201ENST00000419038 768 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 PTP4A1P1-201ENST00000420539 515 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC069154.1-201ENST00000432914 542 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AL645638.1-201ENST00000440519 361 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC015864.1-201ENST00000496512 544 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 SCARNA1-201ENST00000517138 166 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 CYCSP38-201ENST00000559840 322 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC233266.2-201ENST00000567067 528 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 GARSP1-201ENST00000570895 719 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 TXNP4-201ENST00000575018 310 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC005244.1-201ENST00000582566 339 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 MIR4760-201ENST00000585040 80 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AC133794.1-201ENST00000602731 914 ntBASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP3Q96JB5 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 BCORP1-203ENST00000513194 5093 ntBASIC6.65□□□□□ -1.35
CDK5RAP3Q96JB5 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 MTCO2P1-201ENST00000424648 477 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 MORF4L1P7-201ENST00000426038 703 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 MRPL50P1-201ENST00000431951 384 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 HMGN1P5-201ENST00000448591 263 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 MTND2P6-201ENST00000455337 1030 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 OSTCP1-201ENST00000455507 450 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 RNU1-88P-201ENST00000459274 128 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 RN7SL170P-201ENST00000487098 295 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC093801.2-201ENST00000503966 1050 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 TOMM22P4-201ENST00000511318 336 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC112198.4-201ENST00000515450 351 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms