Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 AL132857.1-201ENST00000555180 708 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC4Q92889 AC025283.1-201ENST00000572039 734 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.85□□□□□ -1.31
ERCC4Q92889 AC040904.1-201ENST00000590850 223 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 NIFKP6-201ENST00000598115 845 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AC012368.3-201ENST00000604190 219 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AL365400.2-201ENST00000605604 902 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AC021851.1-201ENST00000608537 1082 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC4Q92889 AL355493.4-201ENST00000618530 292 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC4Q92889 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC4Q92889 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC4Q92889 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ERCC4Q92889 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.84□□□□□ -1.31
ERCC4Q92889 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.84□□□□□ -1.31
ERCC4Q92889 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.84□□□□□ -1.31
ERCC4Q92889 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ERCC4Q92889 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
ERCC4Q92889 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ERCC4Q92889 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 MIR16-2-201ENST00000362117 81 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 RNU6-354P-201ENST00000383862 107 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 RNU6-610P-201ENST00000384264 107 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 VIM2P-201ENST00000402383 1294 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL096800.1-201ENST00000405326 893 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 ZNF602P-201ENST00000405929 924 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC096533.1-201ENST00000411645 353 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC107081.1-201ENST00000414975 361 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 HIGD1AP15-201ENST00000416198 280 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC241520.1-201ENST00000422654 1099 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 GPN3P1-201ENST00000423883 535 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL035246.1-201ENST00000433554 1255 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 RAB9AP5-201ENST00000437794 597 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 RAB9AP2-201ENST00000443911 597 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 RPS18P1-201ENST00000447840 458 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC4Q92889 HIGD1AP16-201ENST00000450986 258 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC004890.1-201ENST00000461005 181 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC008379.1-201ENST00000463655 464 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC124945.1-201ENST00000485133 188 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 EIF4E2P2-201ENST00000492033 736 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC021106.1-201ENST00000509020 1058 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 CYP4F27P-201ENST00000514557 494 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AP001207.2-201ENST00000519490 539 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC087894.1-201ENST00000538359 518 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 BTG1P1-201ENST00000540396 508 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.84□□□□□ -1.31
ERCC4Q92889 NOP56P3-201ENST00000549457 385 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL450336.1-201ENST00000605180 586 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC015819.1-201ENST00000613588 663 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL512427.1-201ENST00000618593 349 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 AC089999.3-201ENST00000622440 577 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 FRG1DP-201ENST00000635586 771 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 OR5AC4P-202ENST00000642086 985 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 WDR95P-201ENST00000425638 1542 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 LINC02019-201ENST00000608605 2060 ntBASIC6.84□□□□□ -1.31
ERCC4Q92889 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC4Q92889 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
ERCC4Q92889 AC011416.1-201ENST00000514947 1732 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms