Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC020656.2-201ENST00000613291 5309 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RNA5SP279-201ENST00000365513 117 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RNU11-201ENST00000387069 134 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RANP4-201ENST00000413361 655 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC013262.1-201ENST00000426710 252 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC015983.1-201ENST00000441577 373 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL356121.1-201ENST00000442911 156 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 BMS1P10-201ENST00000443754 1120 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 OR52I1-201ENST00000450052 1050 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 STRADBP1-201ENST00000478954 1281 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RPS27P20-201ENST00000492051 246 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 MRPS5P3-201ENST00000515577 166 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AP005119.1-201ENST00000580956 292 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL360012.1-201ENST00000602813 131 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL445435.1-201ENST00000604232 665 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC004241.3-201ENST00000611728 517 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AC079776.5-201ENST00000641920 211 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RBPJP7-201ENST00000442803 1447 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RBPJP5-201ENST00000449433 1447 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL049634.1-201ENST00000453770 1720 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL354854.1-201ENST00000455940 1363 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC123769.1-201ENST00000530992 3192 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 MIR191-201ENST00000384873 92 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC087752.1-201ENST00000391360 558 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 Z86062.1-201ENST00000406773 777 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AL606495.1-201ENST00000422100 813 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC099670.2-201ENST00000435130 321 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC104164.3-201ENST00000467363 1258 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC105918.1-201ENST00000474399 838 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC128716.1-201ENST00000475129 166 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 NPM1P29-201ENST00000483112 803 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 EIF4E2P2-201ENST00000492033 736 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC113367.2-201ENST00000505749 160 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC112484.3-201ENST00000505910 329 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC108103.1-201ENST00000511286 446 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC016550.3-201ENST00000515706 767 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 RN7SKP35-201ENST00000517210 151 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC008147.3-201ENST00000548666 354 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 GLRXP2-201ENST00000555594 321 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 DPPA3P2-202ENST00000557188 1219 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ZNF322P1-201ENST00000568013 1209 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 FAM27E2-201ENST00000619668 403 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AL136228.1-201ENST00000622221 319 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms