Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
ALFQ53S48 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.15□□□□□ -1.42
ALFQ53S48 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.15□□□□□ -1.42
ALFQ53S48 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.15□□□□□ -1.42
ALFQ53S48 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.15□□□□□ -1.42
ALFQ53S48 AL049870.4-201ENST00000555741 486 ntBASIC6.15□□□□□ -1.42
ALFQ53S48 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.15□□□□□ -1.42
ALFQ53S48 MIR4420-201ENST00000583944 77 ntBASIC6.15□□□□□ -1.42
ALFQ53S48 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.15□□□□□ -1.42
ALFQ53S48 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.15□□□□□ -1.42
ALFQ53S48 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.15□□□□□ -1.42
ALFQ53S48 FO681491.1-202ENST00000623392 737 ntBASIC6.15□□□□□ -1.42
ALFQ53S48 AC073592.7-201ENST00000623659 507 ntBASIC6.15□□□□□ -1.42
ALFQ53S48 AL356094.1-201ENST00000624663 1212 ntBASIC6.15□□□□□ -1.42
ALFQ53S48 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.15□□□□□ -1.42
ALFQ53S48 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ALFQ53S48 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ALFQ53S48 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ALFQ53S48 AL592429.1-201ENST00000403909 1473 ntBASIC6.15□□□□□ -1.43
ALFQ53S48 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
ALFQ53S48 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ALFQ53S48 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ALFQ53S48 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 SELENOWP1-201ENST00000322792 252 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 MIR320B1-201ENST00000390209 79 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 MIR1282-201ENST00000408865 101 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 RNA5SP498-201ENST00000411342 120 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 AC245884.2-201ENST00000426257 404 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.14□□□□□ -1.43
ALFQ53S48 KCTD9P1-201ENST00000430462 1167 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 NDUFS5P5-201ENST00000437256 321 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 VN1R110P-201ENST00000438988 971 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.14□□□□□ -1.43
ALFQ53S48 H3F3BP1-201ENST00000440551 403 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 EIF5AP4-201ENST00000441206 465 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 RPS7P3-201ENST00000443360 580 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 CASP3P1-201ENST00000446037 609 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 NPM1P39-201ENST00000449818 867 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AL162739.1-201ENST00000450606 307 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.14□□□□□ -1.43
ALFQ53S48 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.14□□□□□ -1.43
ALFQ53S48 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.14□□□□□ -1.43
ALFQ53S48 AC114781.3-201ENST00000512083 142 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.14□□□□□ -1.43
ALFQ53S48 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.14□□□□□ -1.43
ALFQ53S48 SCARNA18.1-201ENST00000516330 83 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 snoU109.6-201ENST00000516831 118 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.14□□□□□ -1.43
ALFQ53S48 NANOGNBP2-201ENST00000544753 553 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.14□□□□□ -1.43
ALFQ53S48 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.14□□□□□ -1.43
ALFQ53S48 AL365181.4-201ENST00000609800 547 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 MIR6793-201ENST00000612376 63 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AL121890.2-201ENST00000617644 465 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AC020923.1-201ENST00000624021 917 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.14□□□□□ -1.43
ALFQ53S48 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.14□□□□□ -1.43
ALFQ53S48 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.14□□□□□ -1.43
ALFQ53S48 AP001153.1-201ENST00000641024 338 ntBASIC6.14□□□□□ -1.43
ALFQ53S48 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ALFQ53S48 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ALFQ53S48 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
ALFQ53S48 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ALFQ53S48 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
ALFQ53S48 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.13□□□□□ -1.43
ALFQ53S48 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
ALFQ53S48 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ALFQ53S48 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.13□□□□□ -1.43
ALFQ53S48 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.13□□□□□ -1.43
ALFQ53S48 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ALFQ53S48 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ALFQ53S48 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ALFQ53S48 RNU6-244P-201ENST00000391028 104 ntBASIC6.13□□□□□ -1.43
ALFQ53S48 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ALFQ53S48 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ALFQ53S48 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ALFQ53S48 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.13□□□□□ -1.43
ALFQ53S48 BX284632.2-201ENST00000421091 399 ntBASIC6.13□□□□□ -1.43
ALFQ53S48 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.13□□□□□ -1.43
ALFQ53S48 AL445928.1-201ENST00000435545 222 ntBASIC6.13□□□□□ -1.43
ALFQ53S48 AL512605.1-202ENST00000441919 381 ntBASIC6.13□□□□□ -1.43
ALFQ53S48 RPS10P18-201ENST00000442662 495 ntBASIC6.13□□□□□ -1.43
ALFQ53S48 AL359955.2-201ENST00000445380 353 ntBASIC6.13□□□□□ -1.43
ALFQ53S48 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms