Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC010240.2-201ENST00000445363 1205 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 RPL31P20-201ENST00000449593 360 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 PPIAP27-201ENST00000453800 265 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 RPSAP39-201ENST00000467439 883 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 PCNAP1-201ENST00000505363 709 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 IGHV4-55-201ENST00000520889 368 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AL049779.3-201ENST00000557141 606 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC044860.2-201ENST00000561005 179 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC092718.4-201ENST00000566639 716 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 SNORD95-201ENST00000579879 68 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC004890.3-201ENST00000605566 1095 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC005972.3-201ENST00000606304 481 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC084036.1-201ENST00000609190 508 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC006924.1-201ENST00000610750 559 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 LINC02495-203ENST00000636704 242 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AP001153.1-201ENST00000641024 338 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 AC003985.2-201ENST00000562268 1669 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 GVINP1-202ENST00000531871 7271 ntBASIC5.04□□□□□ -1.6
PDLIM3Q53GG5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL359091.1-201ENST00000449048 1734 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL136984.1-201ENST00000607611 1893 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL592429.1-201ENST00000403909 1473 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC015799.1-201ENST00000622996 3122 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL445238.1-204ENST00000400311 463 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 NPM1P37-201ENST00000403105 874 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 TRIM60P17-201ENST00000415181 719 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 EIF2S2P3-201ENST00000428356 999 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 GTF3AP6-201ENST00000432585 986 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 TXNP2-201ENST00000443918 295 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 RPS15AP29-201ENST00000445539 400 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 MORF4-201ENST00000447135 971 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 OR11I1P-201ENST00000486033 954 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 RPL3P13-201ENST00000550415 216 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 TPRX1P1-201ENST00000557620 319 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC027229.1-201ENST00000583887 253 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC093388.1-201ENST00000609166 430 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC092266.1-201ENST00000610958 165 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AL122125.1-201ENST00000616999 600 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC009032.1-201ENST00000617574 431 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC026367.3-201ENST00000619032 590 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC074276.2-201ENST00000619891 348 ntBASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM3Q53GG5 AC018445.2-201ENST00000622987 260 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms