Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU1-49P-201ENST00000363468 159 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 RNU6-40P-201ENST00000384254 107 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 CCNB2P1-201ENST00000399411 1150 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 RN7SKP222-201ENST00000410651 315 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 RN7SKP121-201ENST00000410842 305 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 RPL21P50-201ENST00000417698 477 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 AC002127.1-201ENST00000421305 225 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 RPS7P14-201ENST00000426405 583 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN1BQ07699 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN1BQ07699 GAPDHP19-201ENST00000431768 1005 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 GAPDHP34-201ENST00000432112 823 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC112492.2-201ENST00000432774 1030 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.21□□□□□ -1.58
SCN1BQ07699 MTND2P21-201ENST00000436242 1042 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 SOCS5P1-201ENST00000440415 949 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 SEPT14P12-201ENST00000442280 560 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 OR2L9P-201ENST00000444456 913 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 GAPDHP23-201ENST00000444823 993 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC025181.1-201ENST00000477507 416 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 AC015864.1-201ENST00000496512 544 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN1BQ07699 RNA5SP206-201ENST00000516703 121 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 snoU109.6-201ENST00000516831 118 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 HMGB1P46-201ENST00000520062 610 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN1BQ07699 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN1BQ07699 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN1BQ07699 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC008507.3-201ENST00000585753 472 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.21□□□□□ -1.58
SCN1BQ07699 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 AC211486.4-201ENST00000621495 113 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 CASC19-246ENST00000641625 1606 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SCN1BQ07699 CASC19-284ENST00000642142 1868 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC017002.4-201ENST00000604721 1525 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC130304.1-201ENST00000622942 2385 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 AL133243.2-201ENST00000610331 1621 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SCN1BQ07699 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 SNORA64.3-201ENST00000365647 134 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 RNU6-532P-201ENST00000384318 107 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SCN1BQ07699 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.2□□□□□ -1.58
SCN1BQ07699 CR848007.2-201ENST00000424918 787 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC108479.1-201ENST00000431142 427 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC243772.1-201ENST00000451620 410 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.2□□□□□ -1.58
SCN1BQ07699 LDHBP2-201ENST00000456969 1005 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.2□□□□□ -1.58
SCN1BQ07699 COX6B1P2-201ENST00000489624 230 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 OR4D12P-201ENST00000509361 911 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 GAPDHP62-201ENST00000515313 990 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AC020937.1-201ENST00000519677 1013 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms