Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.15□□□□□ -1.27
SOX4Q06945 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.15□□□□□ -1.27
SOX4Q06945 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.27
SOX4Q06945 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SOX4Q06945 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.15□□□□□ -1.27
SOX4Q06945 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.15□□□□□ -1.27
SOX4Q06945 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.15□□□□□ -1.27
SOX4Q06945 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SOX4Q06945 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.15□□□□□ -1.27
SOX4Q06945 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SOX4Q06945 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX4Q06945 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SOX4Q06945 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 AC136624.1-201ENST00000400791 413 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 MTCO1P17-201ENST00000411522 491 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 RANP6-201ENST00000413691 644 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC008753.1-201ENST00000423096 284 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX4Q06945 MTND4P23-201ENST00000447723 1363 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 OR51B8P-201ENST00000449892 769 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AL390728.3-201ENST00000452704 270 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX4Q06945 PGBD4P1-201ENST00000473644 407 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC092718.4-201ENST00000566639 716 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX4Q06945 MTND1P15-201ENST00000579262 949 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 RN7SL270P-201ENST00000579643 281 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC025449.1-201ENST00000603896 529 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC090186.1-201ENST00000605991 572 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 AC139769.3-201ENST00000618383 175 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AL137918.1-201ENST00000624542 1922 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 TSHZ2-205ENST00000626626 670 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 SEPT14P19-203ENST00000633205 211 ntBASIC7.14□□□□□ -1.27
SOX4Q06945 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX4Q06945 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SOX4Q06945 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX4Q06945 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
SOX4Q06945 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX4Q06945 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SOX4Q06945 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX4Q06945 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 ASNSP6-201ENST00000592770 1618 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 NXF4-202ENST00000416098 1465 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SOX4Q06945 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 RNU1-87P-201ENST00000363727 170 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 RNU1-84P-201ENST00000365447 164 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms