Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 U3.10-201ENST00000364459 214 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 RNU4-2-201ENST00000365668 141 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AC087752.1-201ENST00000391360 558 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.3□□□□□ -1.24
CALD1Q05682 AL391422.1-201ENST00000402155 436 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.3□□□□□ -1.24
CALD1Q05682 OR6E1P-201ENST00000414424 923 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 GNG5P5-201ENST00000420444 220 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AP000547.1-201ENST00000454360 617 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AC023141.9-201ENST00000458734 412 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 RPS17P5-201ENST00000498293 408 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 RN7SL284P-201ENST00000498823 275 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.3□□□□□ -1.24
CALD1Q05682 RN7SKP253-201ENST00000516424 309 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AC015720.2-201ENST00000567709 334 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AC025857.2-201ENST00000602711 238 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 AC104695.2-201ENST00000605056 775 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.3□□□□□ -1.24
CALD1Q05682 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.3□□□□□ -1.24
CALD1Q05682 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.3□□□□□ -1.24
CALD1Q05682 MIR4302-201ENST00000638058 60 ntBASIC7.3□□□□□ -1.24
CALD1Q05682 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
CALD1Q05682 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CALD1Q05682 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CALD1Q05682 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CALD1Q05682 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.3□□□□□ -1.24
CALD1Q05682 AC093849.1-201ENST00000563631 2209 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.29□□□□□ -1.24
CALD1Q05682 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CALD1Q05682 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CALD1Q05682 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CALD1Q05682 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CALD1Q05682 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.29□□□□□ -1.24
CALD1Q05682 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.29□□□□□ -1.24
CALD1Q05682 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CALD1Q05682 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.29□□□□□ -1.24
CALD1Q05682 VDAC2P4-201ENST00000452925 711 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.29□□□□□ -1.24
CALD1Q05682 RPSAP39-201ENST00000467439 883 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 RN7SL466P-201ENST00000497546 295 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 MORF4L2P1-201ENST00000503761 858 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.29□□□□□ -1.24
CALD1Q05682 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.29□□□□□ -1.24
CALD1Q05682 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.29□□□□□ -1.24
CALD1Q05682 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.29□□□□□ -1.24
CALD1Q05682 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.29□□□□□ -1.24
CALD1Q05682 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
CALD1Q05682 AC011445.2-201ENST00000599274 173 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 AL161912.3-201ENST00000605404 628 ntBASIC7.29□□□□□ -1.24
CALD1Q05682 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.29□□□□□ -1.24
CALD1Q05682 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CALD1Q05682 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CALD1Q05682 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CALD1Q05682 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.29□□□□□ -1.24
CALD1Q05682 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CALD1Q05682 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
CALD1Q05682 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CALD1Q05682 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CALD1Q05682 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CALD1Q05682 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.28□□□□□ -1.24
CALD1Q05682 RNA5SP326-201ENST00000363209 110 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 RN7SKP6-201ENST00000364795 319 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 AL512422.1-201ENST00000407033 553 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 RIMKLBP2-201ENST00000424737 654 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.28□□□□□ -1.24
CALD1Q05682 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.28□□□□□ -1.24
CALD1Q05682 AL358876.1-201ENST00000453364 1075 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.28□□□□□ -1.24
CALD1Q05682 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC7.28□□□□□ -1.24
CALD1Q05682 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.28□□□□□ -1.24
CALD1Q05682 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 AC027544.3-201ENST00000535082 757 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 AC122688.1-201ENST00000541494 223 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.28□□□□□ -1.24
CALD1Q05682 AC012616.1-201ENST00000600294 197 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.28□□□□□ -1.24
CALD1Q05682 AC006363.1-201ENST00000603806 463 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 AL353729.2-201ENST00000605859 1249 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.28□□□□□ -1.24
CALD1Q05682 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 AL449283.1-201ENST00000602631 3403 ntBASIC7.28□□□□□ -1.24
CALD1Q05682 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CALD1Q05682 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
CALD1Q05682 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CALD1Q05682 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms