Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC104108.1-201ENST00000509930 412 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AL390198.2-201ENST00000510553 222 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 OR52H2P-201ENST00000514607 902 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 HSD3BP3-201ENST00000514706 994 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX6-1P78426 MTATP6P15-201ENST00000527233 835 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.79□□□□□ -1.48
NKX6-1P78426 MTND4P33-201ENST00000556706 766 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC007346.2-201ENST00000564816 892 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 ANP32BP1-202ENST00000568553 737 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 MTND3P13-201ENST00000574391 343 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC008751.2-201ENST00000597885 980 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC025588.2-201ENST00000604851 466 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC097478.2-201ENST00000610572 514 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC231759.1-201ENST00000616455 597 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 MIR6729-201ENST00000618194 65 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC015660.5-201ENST00000623238 564 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.79□□□□□ -1.48
NKX6-1P78426 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NKX6-1P78426 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NKX6-1P78426 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NKX6-1P78426 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX6-1P78426 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX6-1P78426 AC079949.2-201ENST00000617117 2933 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NKX6-1P78426 MAPK10-357ENST00000641831 2858 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX6-1P78426 UGT2B27P-201ENST00000505092 1620 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX6-1P78426 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX6-1P78426 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX6-1P78426 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NKX6-1P78426 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX6-1P78426 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX6-1P78426 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX6-1P78426 RNU6-549P-201ENST00000384433 107 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NKX6-1P78426 AL136310.1-201ENST00000404926 654 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NKX6-1P78426 RPS7P9-201ENST00000414704 586 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX6-1P78426 HMGB1P49-201ENST00000418882 569 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AL360013.1-201ENST00000419031 858 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AL513175.2-201ENST00000422071 443 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX6-1P78426 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX6-1P78426 HIGD1AP4-201ENST00000430194 280 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 FTH1P16-201ENST00000435241 552 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX6-1P78426 PMS2P9-201ENST00000441237 515 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX6-1P78426 CASP3P1-201ENST00000446037 609 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX6-1P78426 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 PSAT1P4-201ENST00000466500 526 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX6-1P78426 AC091544.1-201ENST00000484702 348 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NKX6-1P78426 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.78□□□□□ -1.48
NKX6-1P78426 GTF2H2B-203ENST00000508065 1432 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 HMGN1P16-201ENST00000508308 283 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AC008565.1-201ENST00000509046 885 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 RNA5SP441-201ENST00000516809 88 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 SNORA81.2-201ENST00000516868 170 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX6-1P78426 AC008083.2-201ENST00000546707 476 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.78□□□□□ -1.48
NKX6-1P78426 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX6-1P78426 AC093278.2-201ENST00000564956 2485 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 MIR4502-201ENST00000580432 81 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX6-1P78426 AC125494.3-201ENST00000602759 455 ntBASIC5.78□□□□□ -1.48
NKX6-1P78426 AL035411.2-201ENST00000604022 421 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms