Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 MFSD8-219ENST00000641228 2559 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 LINC02019-201ENST00000608605 2060 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
RHBDL3P58872 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
RHBDL3P58872 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.92□□□□□ -1.3
RHBDL3P58872 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RHBDL3P58872 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.92□□□□□ -1.3
RHBDL3P58872 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RHBDL3P58872 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.92□□□□□ -1.3
RHBDL3P58872 OR6E1P-201ENST00000414424 923 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.92□□□□□ -1.3
RHBDL3P58872 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.92□□□□□ -1.3
RHBDL3P58872 RPL23AP4-201ENST00000427757 463 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.92□□□□□ -1.3
RHBDL3P58872 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.92□□□□□ -1.3
RHBDL3P58872 FMO7P-201ENST00000436045 768 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 CALM1P2-201ENST00000452941 448 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 RPL5P13-201ENST00000462840 709 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.92□□□□□ -1.3
RHBDL3P58872 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.92□□□□□ -1.3
RHBDL3P58872 IGKV2-18-201ENST00000522607 343 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 AC027026.1-201ENST00000532323 742 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 MIR4260-201ENST00000583107 67 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 AP000864.1-201ENST00000609424 650 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 AC073592.7-201ENST00000623659 507 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RHBDL3P58872 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.92□□□□□ -1.3
RHBDL3P58872 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RHBDL3P58872 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 LCOR-201ENST00000286067 4542 ntBASIC6.92□□□□□ -1.3
RHBDL3P58872 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
RHBDL3P58872 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RHBDL3P58872 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 AC125336.1-201ENST00000508893 2827 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 VPS35P1-201ENST00000563400 1518 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RHBDL3P58872 AC007114.2-201ENST00000576014 4281 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RHBDL3P58872 YES1P1-201ENST00000418510 1628 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.91□□□□□ -1.3
RHBDL3P58872 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.91□□□□□ -1.3
RHBDL3P58872 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.91□□□□□ -1.3
RHBDL3P58872 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.91□□□□□ -1.3
RHBDL3P58872 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RHBDL3P58872 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RHBDL3P58872 RN7SKP124-201ENST00000364730 341 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.91□□□□□ -1.3
RHBDL3P58872 RPS17P17-201ENST00000419392 409 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 MARK2P12-201ENST00000420129 585 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 AC012075.1-201ENST00000436549 580 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 MTND4P15-201ENST00000437913 1033 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 PA2G4P6-201ENST00000438325 1197 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.91□□□□□ -1.3
RHBDL3P58872 AC004129.2-201ENST00000457229 287 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.91□□□□□ -1.3
RHBDL3P58872 AC110749.1-201ENST00000462007 357 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 RN7SL629P-201ENST00000489622 285 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 AC073610.1-201ENST00000489971 396 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 EIF3LP3-201ENST00000495197 822 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 AC109481.1-201ENST00000509173 282 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 MTCYBP19-201ENST00000517463 1124 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 IGHV3-63-201ENST00000518422 341 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 HMGB1P46-201ENST00000520062 610 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RHBDL3P58872 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.91□□□□□ -1.3
RHBDL3P58872 IGBP1P1-201ENST00000554337 1009 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 AL049779.3-201ENST00000557141 606 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RHBDL3P58872 OR4H6P-202ENST00000603819 340 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RHBDL3P58872 AC073365.1-203ENST00000641055 1992 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RHBDL3P58872 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms