Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.19□□□□□ -1.26
RIPK4P57078 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RIPK4P57078 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.19□□□□□ -1.26
RIPK4P57078 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RIPK4P57078 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.19□□□□□ -1.26
RIPK4P57078 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.19□□□□□ -1.26
RIPK4P57078 AC136428.4-201ENST00000634254 1155 ntBASIC7.19□□□□□ -1.26
RIPK4P57078 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RIPK4P57078 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.19□□□□□ -1.26
RIPK4P57078 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RIPK4P57078 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
RIPK4P57078 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.18□□□□□ -1.26
RIPK4P57078 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.18□□□□□ -1.26
RIPK4P57078 ADAM24P-201ENST00000398655 2101 ntBASIC7.18□□□□□ -1.26
RIPK4P57078 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 RN7SKP186-201ENST00000365371 303 ntBASIC7.18□□□□□ -1.26
RIPK4P57078 RN7SKP17-201ENST00000411242 351 ntBASIC7.18□□□□□ -1.26
RIPK4P57078 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.18□□□□□ -1.26
RIPK4P57078 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.18□□□□□ -1.26
RIPK4P57078 AC009962.1-201ENST00000567327 3813 ntBASIC7.18□□□□□ -1.26
RIPK4P57078 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.18□□□□□ -1.26
RIPK4P57078 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.18□□□□□ -1.26
RIPK4P57078 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.18□□□□□ -1.26
RIPK4P57078 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.18□□□□□ -1.26
RIPK4P57078 AC079776.5-201ENST00000641920 211 ntBASIC7.18□□□□□ -1.26
RIPK4P57078 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.18□□□□□ -1.26
RIPK4P57078 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.18□□□□□ -1.26
RIPK4P57078 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RIPK4P57078 AL353796.1-201ENST00000561542 3241 ntBASIC7.18□□□□□ -1.26
RIPK4P57078 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.17□□□□□ -1.26
RIPK4P57078 Z83820.1-201ENST00000456978 1499 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.17□□□□□ -1.26
RIPK4P57078 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
RIPK4P57078 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
RIPK4P57078 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RIPK4P57078 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RIPK4P57078 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RIPK4P57078 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
RIPK4P57078 MIR133A2-201ENST00000347538 102 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 MIR133B-201ENST00000362210 119 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 AL133388.1-201ENST00000404509 287 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 AL390774.1-201ENST00000411924 246 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.17□□□□□ -1.26
RIPK4P57078 PRUNEP1-201ENST00000425846 705 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 CYCSP6-201ENST00000434498 302 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 AC021106.1-201ENST00000509020 1058 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 MTND6P2-201ENST00000512226 524 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RIPK4P57078 AC126177.5-201ENST00000549599 178 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.17□□□□□ -1.26
RIPK4P57078 AP000769.2-201ENST00000602344 396 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.17□□□□□ -1.26
RIPK4P57078 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.17□□□□□ -1.26
RIPK4P57078 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RIPK4P57078 CIR1P2-201ENST00000514821 1342 ntBASIC7.17□□□□□ -1.26
RIPK4P57078 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RIPK4P57078 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RIPK4P57078 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RIPK4P57078 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RIPK4P57078 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.16□□□□□ -1.26
RIPK4P57078 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RIPK4P57078 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.16□□□□□ -1.26
RIPK4P57078 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RIPK4P57078 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RIPK4P57078 GTF3AP1-201ENST00000416942 1004 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 RPL7L1P9-201ENST00000431298 745 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 RN7SL188P-201ENST00000469842 285 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 RPEP1-201ENST00000504507 658 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.16□□□□□ -1.26
RIPK4P57078 AC136777.2-201ENST00000522979 358 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.16□□□□□ -1.26
RIPK4P57078 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.16□□□□□ -1.26
RIPK4P57078 IMMP1LP3-201ENST00000604197 224 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 MIR6826-201ENST00000617808 98 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 AC073869.8-201ENST00000641806 335 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RIPK4P57078 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RIPK4P57078 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RIPK4P57078 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.16□□□□□ -1.26
RIPK4P57078 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RIPK4P57078 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RIPK4P57078 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.16□□□□□ -1.26
RIPK4P57078 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
RIPK4P57078 AC083899.1-201ENST00000454465 3819 ntBASIC7.16□□□□□ -1.26
RIPK4P57078 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RIPK4P57078 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RIPK4P57078 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms