Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 U3.3-201ENST00000362986 216 ntBASIC6.64□□□□□ -1.35
NUP98P52948 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP98P52948 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NUP98P52948 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.64□□□□□ -1.35
NUP98P52948 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 RNA5SP228-201ENST00000516232 133 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 PCNPP1-201ENST00000552501 511 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AC011840.5-201ENST00000582125 771 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AL356752.1-201ENST00000615844 593 ntBASIC6.64□□□□□ -1.35
NUP98P52948 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP98P52948 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
NUP98P52948 AC003973.3-201ENST00000624863 2822 ntBASIC6.63□□□□□ -1.35
NUP98P52948 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 CASC19-221ENST00000641309 1382 ntBASIC6.63□□□□□ -1.35
NUP98P52948 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
NUP98P52948 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 RNA5SP90-201ENST00000364801 99 ntBASIC6.63□□□□□ -1.35
NUP98P52948 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NUP98P52948 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.63□□□□□ -1.35
NUP98P52948 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.63□□□□□ -1.35
NUP98P52948 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.63□□□□□ -1.35
NUP98P52948 BRD9P1-201ENST00000529855 560 ntBASIC6.63□□□□□ -1.35
NUP98P52948 AC009117.1-201ENST00000563948 554 ntBASIC6.63□□□□□ -1.35
NUP98P52948 AL390726.5-202ENST00000564800 256 ntBASIC6.63□□□□□ -1.35
NUP98P52948 AP001357.1-201ENST00000586304 1053 ntBASIC6.63□□□□□ -1.35
NUP98P52948 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.63□□□□□ -1.35
NUP98P52948 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 AC112694.2-201ENST00000623697 768 ntBASIC6.63□□□□□ -1.35
NUP98P52948 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP98P52948 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP98P52948 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 AC131971.1-201ENST00000332881 1482 ntBASIC6.62□□□□□ -1.35
NUP98P52948 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 AC104964.3-201ENST00000606115 2860 ntBASIC6.62□□□□□ -1.35
NUP98P52948 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
NUP98P52948 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NUP98P52948 HSPA8P15-201ENST00000401676 786 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.62□□□□□ -1.35
NUP98P52948 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.62□□□□□ -1.35
NUP98P52948 AC002075.1-201ENST00000457396 676 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AC108161.1-201ENST00000461060 402 ntBASIC6.62□□□□□ -1.35
NUP98P52948 RN7SL814P-201ENST00000487715 300 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.62□□□□□ -1.35
NUP98P52948 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.62□□□□□ -1.35
NUP98P52948 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 AP000550.3-201ENST00000637734 379 ntBASIC6.62□□□□□ -1.35
NUP98P52948 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.62□□□□□ -1.35
NUP98P52948 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
NUP98P52948 AC007996.1-201ENST00000620414 2821 ntBASIC6.62□□□□□ -1.35
NUP98P52948 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.62□□□□□ -1.35
NUP98P52948 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 THAP12P4-201ENST00000528321 2266 ntBASIC6.62□□□□□ -1.35
NUP98P52948 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.62□□□□□ -1.35
NUP98P52948 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 RN7SKP149-201ENST00000363008 344 ntBASIC6.62□□□□□ -1.35
NUP98P52948 RNU1-74P-201ENST00000384108 171 ntBASIC6.62□□□□□ -1.35
NUP98P52948 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.62□□□□□ -1.35
NUP98P52948 RPS4XP16-201ENST00000427198 791 ntBASIC6.62□□□□□ -1.35
NUP98P52948 BX679664.2-201ENST00000439282 283 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.62□□□□□ -1.35
NUP98P52948 AC093890.1-201ENST00000502554 540 ntBASIC6.62□□□□□ -1.35
NUP98P52948 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AC130364.2-201ENST00000528639 604 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AC092490.3-201ENST00000545370 572 ntBASIC6.62□□□□□ -1.35
NUP98P52948 HNRNPCP1-201ENST00000556181 766 ntBASIC6.62□□□□□ -1.35
NUP98P52948 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
NUP98P52948 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.62□□□□□ -1.35
NUP98P52948 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.62□□□□□ -1.35
NUP98P52948 uc_338.18-201ENST00000615451 175 ntBASIC6.62□□□□□ -1.35
NUP98P52948 AL353662.3-201ENST00000625131 237 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms