Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 AL359513.1-201ENST00000614364 557 ntBASIC5.56□□□□□ -1.52
PDX1P52945 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 MAPK10-350ENST00000641777 965 ntBASIC5.56□□□□□ -1.52
PDX1P52945 AC053481.2-202ENST00000582394 1500 ntBASIC5.56□□□□□ -1.52
PDX1P52945 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 AL121839.2-201ENST00000565058 6943 ntBASIC5.56□□□□□ -1.52
PDX1P52945 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 AC114786.1-201ENST00000512892 1415 ntBASIC5.56□□□□□ -1.52
PDX1P52945 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDX1P52945 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDX1P52945 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDX1P52945 GTF2IP4-201ENST00000453092 2054 ntBASIC5.55□□□□□ -1.52
PDX1P52945 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 AL359955.1-201ENST00000455242 3275 ntBASIC5.55□□□□□ -1.52
PDX1P52945 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 AL159987.1-201ENST00000347911 293 ntBASIC5.55□□□□□ -1.52
PDX1P52945 Y_RNA.62-201ENST00000362840 99 ntBASIC5.55□□□□□ -1.52
PDX1P52945 AL121977.1-201ENST00000401636 979 ntBASIC5.55□□□□□ -1.52
PDX1P52945 AL136116.2-201ENST00000404020 785 ntBASIC5.55□□□□□ -1.52
PDX1P52945 RNU4-34P-201ENST00000410431 124 ntBASIC5.55□□□□□ -1.52
PDX1P52945 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 AC113412.1-201ENST00000425840 504 ntBASIC5.55□□□□□ -1.52
PDX1P52945 THAP12P8-201ENST00000447914 2115 ntBASIC5.55□□□□□ -1.52
PDX1P52945 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 RANP1-206ENST00000455094 651 ntBASIC5.55□□□□□ -1.52
PDX1P52945 PFN1P6-201ENST00000476786 399 ntBASIC5.55□□□□□ -1.52
PDX1P52945 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 RPL32P33-201ENST00000487023 394 ntBASIC5.55□□□□□ -1.52
PDX1P52945 TRBV5-2-201ENST00000489095 273 ntBASIC5.55□□□□□ -1.52
PDX1P52945 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.55□□□□□ -1.52
PDX1P52945 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.55□□□□□ -1.52
PDX1P52945 AP006245.2-201ENST00000522004 300 ntBASIC5.55□□□□□ -1.52
PDX1P52945 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.55□□□□□ -1.52
PDX1P52945 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 AC087272.1-201ENST00000523624 533 ntBASIC5.55□□□□□ -1.52
PDX1P52945 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.55□□□□□ -1.52
PDX1P52945 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.55□□□□□ -1.52
PDX1P52945 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 AC044860.2-201ENST00000561005 179 ntBASIC5.55□□□□□ -1.52
PDX1P52945 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.55□□□□□ -1.52
PDX1P52945 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.55□□□□□ -1.52
PDX1P52945 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 AC005224.3-201ENST00000584683 2140 ntBASIC5.55□□□□□ -1.52
PDX1P52945 FKBP1AP1-201ENST00000594588 318 ntBASIC5.55□□□□□ -1.52
PDX1P52945 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 AC008536.1-201ENST00000602872 669 ntBASIC5.55□□□□□ -1.52
PDX1P52945 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.55□□□□□ -1.52
PDX1P52945 AC104820.1-201ENST00000624183 307 ntBASIC5.55□□□□□ -1.52
PDX1P52945 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDX1P52945 PABPC1P6-201ENST00000445594 1829 ntBASIC5.55□□□□□ -1.52
PDX1P52945 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.55□□□□□ -1.52
PDX1P52945 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PDX1P52945 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.54□□□□□ -1.52
PDX1P52945 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDX1P52945 AL929601.4-201ENST00000613011 1341 ntBASIC5.54□□□□□ -1.52
PDX1P52945 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDX1P52945 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDX1P52945 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDX1P52945 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDX1P52945 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 AL138820.1-201ENST00000617901 5305 ntBASIC5.54□□□□□ -1.52
PDX1P52945 RNU1-19P-201ENST00000363306 165 ntBASIC5.54□□□□□ -1.52
PDX1P52945 RNA5SP131-201ENST00000365452 119 ntBASIC5.54□□□□□ -1.52
PDX1P52945 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.54□□□□□ -1.52
PDX1P52945 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDX1P52945 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDX1P52945 AL607077.1-201ENST00000401718 499 ntBASIC5.54□□□□□ -1.52
PDX1P52945 MIR1286-201ENST00000408112 78 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 LDHAP2-201ENST00000437325 985 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AL513343.1-201ENST00000451818 792 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.54□□□□□ -1.52
PDX1P52945 AC093270.2-201ENST00000486157 792 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.54□□□□□ -1.52
PDX1P52945 AC008953.1-201ENST00000497334 318 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms