Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AL133351.3-201ENST00000454998 193 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC008410.1-201ENST00000483777 339 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AL079303.1-201ENST00000486611 463 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC009567.2-201ENST00000502989 349 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 IMPA1P1-201ENST00000510718 842 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC130366.1-201ENST00000526505 1192 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 OR9G2P-201ENST00000533326 880 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.34□□□□□ -1.55
GTF2A1P52655 RPL41P2-201ENST00000544920 409 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC089984.3-201ENST00000552838 363 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.34□□□□□ -1.55
GTF2A1P52655 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AL356752.1-201ENST00000615844 593 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 BX005214.3-202ENST00000619809 325 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AL035661.1-201ENST00000620459 1144 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.34□□□□□ -1.55
GTF2A1P52655 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 AL121886.1-201ENST00000358609 435 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 RNA5SP346-201ENST00000363541 121 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 AC092634.1-201ENST00000366505 199 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 MIR708-201ENST00000390708 88 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 AL033519.1-201ENST00000407266 307 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 RPL21P50-201ENST00000417698 477 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 GAPDHP49-201ENST00000421421 961 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
GTF2A1P52655 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 EMC3-AS1-205ENST00000438698 534 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 RPS10P14-201ENST00000440748 502 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.33□□□□□ -1.56
GTF2A1P52655 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.33□□□□□ -1.56
GTF2A1P52655 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AL929410.2-201ENST00000451170 189 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 SDC4P-201ENST00000453285 601 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 RPL38P3-201ENST00000484463 213 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.33□□□□□ -1.56
GTF2A1P52655 RNU6-1334P-201ENST00000516032 105 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 RNA5SP206-201ENST00000516703 121 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 MIR2117-201ENST00000516780 80 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AC005632.2-201ENST00000564271 828 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 MIR8082-201ENST00000612488 81 ntBASIC5.33□□□□□ -1.56
GTF2A1P52655 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
GTF2A1P52655 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF2A1P52655 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.33□□□□□ -1.56
GTF2A1P52655 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF2A1P52655 AC068254.2-201ENST00000623938 3577 ntBASIC5.32□□□□□ -1.56
GTF2A1P52655 MAPK10-303ENST00000641324 3959 ntBASIC5.32□□□□□ -1.56
GTF2A1P52655 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.32□□□□□ -1.56
GTF2A1P52655 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GTF2A1P52655 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GTF2A1P52655 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.32□□□□□ -1.56
GTF2A1P52655 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms