Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC123769.1-201ENST00000530992 3192 ntBASIC5.32□□□□□ -1.56
SOX2P48431 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 RNU6-1005P-201ENST00000384519 107 ntBASIC5.32□□□□□ -1.56
SOX2P48431 MIR138-2-201ENST00000384916 84 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC003045.1-201ENST00000398779 713 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AL096711.1-201ENST00000404780 554 ntBASIC5.32□□□□□ -1.56
SOX2P48431 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 RN7SKP17-201ENST00000411242 351 ntBASIC5.32□□□□□ -1.56
SOX2P48431 Z68694.1-201ENST00000413929 841 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 PNRC2P1-201ENST00000423940 420 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 MTCYBP29-201ENST00000436327 1006 ntBASIC5.32□□□□□ -1.56
SOX2P48431 EMC3-AS1-205ENST00000438698 534 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 LARP7P4-201ENST00000481075 878 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC005017.1-201ENST00000482002 490 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 TOMM22P4-201ENST00000511318 336 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.32□□□□□ -1.56
SOX2P48431 RNU6-311P-201ENST00000516224 102 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 DUXAP5-201ENST00000529668 529 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC023538.1-201ENST00000534576 736 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC124891.1-201ENST00000536322 519 ntBASIC5.32□□□□□ -1.56
SOX2P48431 BTG1P1-201ENST00000540396 508 ntBASIC5.32□□□□□ -1.56
SOX2P48431 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.32□□□□□ -1.56
SOX2P48431 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 CHEK2P2-201ENST00000554701 672 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 AL049779.3-201ENST00000557141 606 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC090888.2-201ENST00000559765 1144 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 NIFKP6-201ENST00000598115 845 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC009237.12-201ENST00000604755 742 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AC141002.1-201ENST00000607025 279 ntBASIC5.32□□□□□ -1.56
SOX2P48431 AL591167.1-201ENST00000607321 456 ntBASIC5.32□□□□□ -1.56
SOX2P48431 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 MTND2P41-201ENST00000637599 773 ntBASIC5.32□□□□□ -1.56
SOX2P48431 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SOX2P48431 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 GTF2IP4-201ENST00000453092 2054 ntBASIC5.32□□□□□ -1.56
SOX2P48431 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 AP000432.2-201ENST00000624164 2048 ntBASIC5.31□□□□□ -1.56
SOX2P48431 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX2P48431 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX2P48431 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX2P48431 MFSD8-213ENST00000641134 1327 ntBASIC5.31□□□□□ -1.56
SOX2P48431 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SOX2P48431 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 SNORD56.4-201ENST00000363883 71 ntBASIC5.31□□□□□ -1.56
SOX2P48431 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SOX2P48431 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.31□□□□□ -1.56
SOX2P48431 RPL5P19-201ENST00000404228 893 ntBASIC5.31□□□□□ -1.56
SOX2P48431 ATF1P1-201ENST00000406040 927 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AL117344.1-201ENST00000407196 616 ntBASIC5.31□□□□□ -1.56
SOX2P48431 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 UBE2V1P11-201ENST00000411559 285 ntBASIC5.31□□□□□ -1.56
SOX2P48431 DHFRP2-201ENST00000414224 547 ntBASIC5.31□□□□□ -1.56
SOX2P48431 PTCD2P2-201ENST00000415579 1095 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 AC112492.2-201ENST00000432774 1030 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC073410.1-201ENST00000435125 589 ntBASIC5.31□□□□□ -1.56
SOX2P48431 GAPDHP37-201ENST00000442317 968 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms