Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HNF4AP41235 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
HNF4AP41235 FBXL21-201ENST00000297158 1305 ntBASIC5.65□□□□□ -1.51
HNF4AP41235 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HNF4AP41235 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.65□□□□□ -1.51
HNF4AP41235 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HNF4AP41235 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HNF4AP41235 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 NXF4-202ENST00000416098 1465 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 AP004607.3-201ENST00000530354 3915 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HNF4AP41235 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 AL121950.1-201ENST00000624993 2077 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
HNF4AP41235 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 RNA5SP453-201ENST00000362503 119 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 RNU4-23P-201ENST00000362839 140 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 RN7SKP78-201ENST00000364711 318 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.64□□□□□ -1.51
HNF4AP41235 MIR621-201ENST00000384919 96 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 RN7SKP279-201ENST00000411383 298 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.64□□□□□ -1.51
HNF4AP41235 AC013470.3-201ENST00000420252 1194 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.64□□□□□ -1.51
HNF4AP41235 AC019205.1-201ENST00000421830 730 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 VN1R21P-201ENST00000426703 765 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 DEFA9P-201ENST00000433042 285 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.64□□□□□ -1.51
HNF4AP41235 AC015983.1-201ENST00000441577 373 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 AC002553.2-201ENST00000453217 340 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.64□□□□□ -1.51
HNF4AP41235 RN7SL193P-201ENST00000491708 276 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 LSM3P4-201ENST00000502948 309 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 AC025458.1-201ENST00000506046 166 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 RNA5SP438-201ENST00000516561 112 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.64□□□□□ -1.51
HNF4AP41235 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HNF4AP41235 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.64□□□□□ -1.51
HNF4AP41235 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.64□□□□□ -1.51
HNF4AP41235 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.64□□□□□ -1.51
HNF4AP41235 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.64□□□□□ -1.51
HNF4AP41235 SNX6P1-201ENST00000601728 1224 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 AC079315.1-201ENST00000602952 623 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 AL138895.2-201ENST00000603019 178 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 AL121890.2-201ENST00000617644 465 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.64□□□□□ -1.51
HNF4AP41235 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HNF4AP41235 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HNF4AP41235 HSPA8P17-201ENST00000427029 1382 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.64□□□□□ -1.51
HNF4AP41235 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 AC011933.2-201ENST00000578539 2790 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 RNA5SP273-201ENST00000362484 113 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 RNU6-1251P-201ENST00000364502 107 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HNF4AP41235 RPL10P10-201ENST00000403509 664 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC066692.1-201ENST00000421721 457 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.63□□□□□ -1.51
HNF4AP41235 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.63□□□□□ -1.51
HNF4AP41235 TPTE2P1-204ENST00000435256 593 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.63□□□□□ -1.51
HNF4AP41235 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.63□□□□□ -1.51
HNF4AP41235 AC069277.2-201ENST00000454211 432 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 HLA-DPA3-207ENST00000454398 229 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 ACA64.1-201ENST00000459171 127 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AL122020.1-201ENST00000472287 459 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 Y_RNA.667-201ENST00000516212 107 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.63□□□□□ -1.51
HNF4AP41235 AP002373.2-201ENST00000541631 1060 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC068305.2-201ENST00000550567 1205 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 AC091078.2-201ENST00000557145 559 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.63□□□□□ -1.51
HNF4AP41235 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.63□□□□□ -1.51
HNF4AP41235 MTATP6P25-201ENST00000574491 261 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC020915.5-201ENST00000596836 964 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 OR51C1P-201ENST00000608504 942 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms