Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SLC6A4P31645 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SLC6A4P31645 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SLC6A4P31645 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.22□□□□□ -1.41
SLC6A4P31645 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
SLC6A4P31645 ZNF101P1-201ENST00000435701 1720 ntBASIC6.22□□□□□ -1.41
SLC6A4P31645 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.22□□□□□ -1.41
SLC6A4P31645 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SLC6A4P31645 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.22□□□□□ -1.41
SLC6A4P31645 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.22□□□□□ -1.41
SLC6A4P31645 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.21□□□□□ -1.41
SLC6A4P31645 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SLC6A4P31645 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SLC6A4P31645 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SLC6A4P31645 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 AL121768.1-201ENST00000613917 2544 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 ZNF90P1-201ENST00000480493 1951 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.21□□□□□ -1.42
SLC6A4P31645 OR10R3P-201ENST00000361688 942 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 SNORD65-201ENST00000391079 73 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 SNRPEP6-201ENST00000407465 277 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.21□□□□□ -1.42
SLC6A4P31645 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.21□□□□□ -1.42
SLC6A4P31645 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC092634.2-201ENST00000428146 1010 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 AL031313.1-201ENST00000448435 256 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC096992.1-201ENST00000459808 709 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AC092865.4-201ENST00000477936 615 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 SUMO2P5-201ENST00000506790 245 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.21□□□□□ -1.42
SLC6A4P31645 TPM3P3-201ENST00000521343 354 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AP001636.2-201ENST00000525517 696 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC005412.1-201ENST00000580812 1049 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC119403.2-201ENST00000590960 598 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AP001160.4-201ENST00000596971 382 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 NIFKP6-201ENST00000598115 845 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AC234772.3-201ENST00000602277 528 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AL606834.3-201ENST00000602615 496 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AP002802.2-201ENST00000605877 235 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AL133370.2-201ENST00000619934 439 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 AC132825.7-201ENST00000638744 335 ntBASIC6.21□□□□□ -1.42
SLC6A4P31645 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SLC6A4P31645 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.21□□□□□ -1.42
SLC6A4P31645 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC6A4P31645 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SLC6A4P31645 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.2□□□□□ -1.42
SLC6A4P31645 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC6A4P31645 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SLC6A4P31645 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC6A4P31645 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC6A4P31645 AC091305.2-201ENST00000624049 1576 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC6A4P31645 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.2□□□□□ -1.42
SLC6A4P31645 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.2□□□□□ -1.42
SLC6A4P31645 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC6A4P31645 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC6A4P31645 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SLC6A4P31645 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.2□□□□□ -1.42
SLC6A4P31645 RNU4-64P-201ENST00000410795 131 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 HMGN1P20-201ENST00000411849 300 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 MTATP6P20-201ENST00000414147 562 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 HIGD1AP15-201ENST00000416198 280 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 NMD3P2-201ENST00000421815 761 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 IPPKP1-201ENST00000422501 768 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.2□□□□□ -1.42
SLC6A4P31645 XKRYP1-201ENST00000423438 492 ntBASIC6.2□□□□□ -1.42
SLC6A4P31645 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC6A4P31645 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.2□□□□□ -1.42
SLC6A4P31645 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.2□□□□□ -1.42
SLC6A4P31645 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms