Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 UGT2B26P-201ENST00000508672 1613 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 AL391994.1-201ENST00000254724 282 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 BX322650.1-201ENST00000332359 2143 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 OR6C64P-201ENST00000419708 825 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC002069.1-201ENST00000429649 1159 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 MTND2P40-201ENST00000436718 841 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 RPL7P29-201ENST00000437151 728 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 MTCYBP39-201ENST00000437562 491 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 AL138899.2-201ENST00000439139 499 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 RPL12P49-201ENST00000441100 121 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 CYCSP44-201ENST00000448560 313 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 FAR2P1-206ENST00000449736 709 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 DNAJC19P8-201ENST00000452887 259 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC022080.2-201ENST00000452932 533 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 RN7SL870P-201ENST00000460111 296 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 RN7SL168P-201ENST00000463821 279 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 PABPC1P10-201ENST00000464731 381 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 RN7SL655P-201ENST00000486087 298 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AL591122.1-201ENST00000487348 492 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC111193.1-201ENST00000504097 155 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 AC010587.2-201ENST00000511727 448 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 HNRNPKP5-201ENST00000515300 253 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 MTND1P5-201ENST00000517906 940 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC060788.1-201ENST00000521318 469 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 PTTG3P-201ENST00000521862 606 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC018992.1-201ENST00000523778 2149 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 OR5AZ1P-201ENST00000527448 943 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 AC026458.1-201ENST00000564330 438 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC006362.1-201ENST00000567392 174 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC008759.1-201ENST00000589783 983 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC078795.2-201ENST00000602835 1252 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 AC099842.1-201ENST00000619919 596 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC008443.7-201ENST00000622195 246 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 AC006840.1-201ENST00000623069 542 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 AC026108.1-201ENST00000635444 547 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 MIR665-201ENST00000635949 72 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 AC018688.1-201ENST00000636528 1754 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 AC008555.1-201ENST00000561778 2757 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 MT-RNR2-201ENST00000387347 1559 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXC12P31275 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXC12P31275 MTCO1P6-201ENST00000481192 1384 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HOXC12P31275 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.3□□□□□ -1.4
HOXC12P31275 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.3□□□□□ -1.4
HOXC12P31275 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
HOXC12P31275 MTND5P29-201ENST00000458676 1807 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 MAPK10-377ENST00000642006 2752 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 AC018628.1-201ENST00000624147 3819 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 SAMMSON-222ENST00000641901 2727 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.29□□□□□ -1.4
HOXC12P31275 RNU6-1339P-201ENST00000363574 91 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms