Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.145-201ENST00000363527 102 ntBASIC7.72□□□□□ -1.17
VARSP26640 Y_RNA.166-201ENST00000363730 102 ntBASIC7.72□□□□□ -1.17
VARSP26640 RNA5SP427-201ENST00000365323 119 ntBASIC7.72□□□□□ -1.17
VARSP26640 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 CST13P-201ENST00000376992 428 ntBASIC7.72□□□□□ -1.17
VARSP26640 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 AL122016.1-201ENST00000403365 367 ntBASIC7.72□□□□□ -1.17
VARSP26640 HMGB1P11-201ENST00000413899 637 ntBASIC7.72□□□□□ -1.17
VARSP26640 FTH1P10-202ENST00000430907 550 ntBASIC7.72□□□□□ -1.17
VARSP26640 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.72□□□□□ -1.17
VARSP26640 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 KCTD9P5-201ENST00000504141 1170 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.72□□□□□ -1.17
VARSP26640 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 RPL7L1P4-201ENST00000513004 707 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC091839.1-201ENST00000513087 269 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC093677.1-201ENST00000514414 678 ntBASIC7.72□□□□□ -1.17
VARSP26640 RN7SKP13-201ENST00000515933 244 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.72□□□□□ -1.17
VARSP26640 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 AC083923.1-201ENST00000523708 376 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC009729.1-201ENST00000548873 1133 ntBASIC7.72□□□□□ -1.17
VARSP26640 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.72□□□□□ -1.17
VARSP26640 ANP32BP1-202ENST00000568553 737 ntBASIC7.72□□□□□ -1.17
VARSP26640 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.72□□□□□ -1.17
VARSP26640 RPL23AP77-201ENST00000588044 463 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC018638.8-201ENST00000588755 281 ntBASIC7.72□□□□□ -1.17
VARSP26640 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 AC010680.4-201ENST00000605334 543 ntBASIC7.72□□□□□ -1.17
VARSP26640 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 AL109933.4-201ENST00000612111 157 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC016999.2-201ENST00000614692 556 ntBASIC7.72□□□□□ -1.17
VARSP26640 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC090527.3-201ENST00000619041 548 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC018558.4-201ENST00000622153 281 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC005858.4-201ENST00000623191 700 ntBASIC7.72□□□□□ -1.17
VARSP26640 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 AC134503.1-201ENST00000633048 54 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC110994.2-201ENST00000635481 492 ntBASIC7.72□□□□□ -1.17
VARSP26640 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.72□□□□□ -1.17
VARSP26640 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
VARSP26640 ENO1P4-201ENST00000416471 1785 ntBASIC7.71□□□□□ -1.17
VARSP26640 TMEM75-201ENST00000624314 2165 ntBASIC7.71□□□□□ -1.17
VARSP26640 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.71□□□□□ -1.17
VARSP26640 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
VARSP26640 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.71□□□□□ -1.17
VARSP26640 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
VARSP26640 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.71□□□□□ -1.17
VARSP26640 XRCC6P2-201ENST00000457831 1822 ntBASIC7.71□□□□□ -1.17
VARSP26640 CYP1D1P-201ENST00000416662 1433 ntBASIC7.71□□□□□ -1.17
VARSP26640 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
VARSP26640 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
VARSP26640 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARSP26640 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.71□□□□□ -1.18
VARSP26640 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
VARSP26640 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARSP26640 SNORD46-201ENST00000364043 104 ntBASIC7.71□□□□□ -1.18
VARSP26640 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.71□□□□□ -1.18
VARSP26640 RNU6-723P-201ENST00000383973 107 ntBASIC7.71□□□□□ -1.18
VARSP26640 RNU6-574P-201ENST00000384265 107 ntBASIC7.71□□□□□ -1.18
VARSP26640 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.71□□□□□ -1.18
VARSP26640 OR4F7P-201ENST00000402444 931 ntBASIC7.71□□□□□ -1.18
VARSP26640 COX6A1P3-201ENST00000404167 293 ntBASIC7.71□□□□□ -1.18
VARSP26640 OR4F1P-201ENST00000405102 938 ntBASIC7.71□□□□□ -1.18
VARSP26640 MIR548P-201ENST00000408336 84 ntBASIC7.71□□□□□ -1.18
VARSP26640 PPIAP25-201ENST00000420177 540 ntBASIC7.71□□□□□ -1.18
VARSP26640 OR4F2P-201ENST00000424047 938 ntBASIC7.71□□□□□ -1.18
VARSP26640 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.71□□□□□ -1.18
VARSP26640 SDCBPP2-201ENST00000424643 885 ntBASIC7.71□□□□□ -1.18
VARSP26640 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms