Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC231760.1-201ENST00000498002 260 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGA1P17096 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.62□□□□□ -1.51
HMGA1P17096 RN7SL708P-201ENST00000580952 299 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 AC095055.1-201ENST00000603472 1113 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGA1P17096 AF117829.2-201ENST00000619538 361 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 LINC01739-205ENST00000641890 573 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HMGA1P17096 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGA1P17096 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HMGA1P17096 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HMGA1P17096 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGA1P17096 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 MIR937-201ENST00000401271 86 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 U3.36-201ENST00000408418 213 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGA1P17096 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGA1P17096 CLUHP1-201ENST00000435012 1190 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGA1P17096 RPS11P7-201ENST00000442125 465 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGA1P17096 AC104634.1-201ENST00000452720 462 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 CBX1P5-201ENST00000475330 559 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 RPS4XP20-201ENST00000505751 772 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 AC091912.1-201ENST00000511351 248 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGA1P17096 OR8G3P-201ENST00000533406 921 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGA1P17096 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGA1P17096 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGA1P17096 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGA1P17096 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGA1P17096 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGA1P17096 RN7SL356P-201ENST00000582228 248 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 AC006116.3-201ENST00000592968 361 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGA1P17096 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGA1P17096 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGA1P17096 AC087763.1-201ENST00000603391 286 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 TAS2R6P-201ENST00000605022 826 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 AC015712.7-201ENST00000615211 635 ntBASIC5.61□□□□□ -1.51
HMGA1P17096 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HMGA1P17096 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HMGA1P17096 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HMGA1P17096 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGA1P17096 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 AC002090.1-201ENST00000625000 2138 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
HMGA1P17096 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMGA1P17096 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMGA1P17096 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGA1P17096 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 RNU1-146P-201ENST00000364015 165 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGA1P17096 AC006455.6-201ENST00000426192 893 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGA1P17096 AC147055.3-201ENST00000510547 851 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 AC084824.2-201ENST00000548906 345 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGA1P17096 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGA1P17096 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGA1P17096 AC008536.1-201ENST00000602872 669 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 AC004948.1-201ENST00000609858 672 ntBASIC5.6□□□□□ -1.51
HMGA1P17096 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGA1P17096 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HMGA1P17096 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGA1P17096 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGA1P17096 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGA1P17096 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGA1P17096 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGA1P17096 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGA1P17096 AL359715.3-201ENST00000569267 2123 ntBASIC5.59□□□□□ -1.51
HMGA1P17096 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGA1P17096 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms