Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOP2AP11388 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOP2AP11388 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC9.29□□□□□ -0.92
TOP2AP11388 AC016397.1-201ENST00000412463 242 ntBASIC9.29□□□□□ -0.92
TOP2AP11388 snoU13.20-201ENST00000459180 104 ntBASIC9.29□□□□□ -0.92
TOP2AP11388 SCARNA20.4-201ENST00000516969 131 ntBASIC9.29□□□□□ -0.92
TOP2AP11388 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC9.29□□□□□ -0.92
TOP2AP11388 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOP2AP11388 MIR4697-201ENST00000582977 78 ntBASIC9.29□□□□□ -0.92
TOP2AP11388 AL449283.1-201ENST00000602631 3403 ntBASIC9.29□□□□□ -0.92
TOP2AP11388 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.29□□□□□ -0.92
TOP2AP11388 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
TOP2AP11388 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC9.28□□□□□ -0.92
TOP2AP11388 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
TOP2AP11388 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 RNA5SP505-201ENST00000364748 108 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 RPL7P11-201ENST00000437586 658 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 CEACAMP9-201ENST00000442990 513 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 RPL21P133-201ENST00000443666 476 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 HNRNPDLP2-201ENST00000455248 751 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 AC006463.2-201ENST00000473326 348 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC9.28□□□□□ -0.92
TOP2AP11388 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC9.28□□□□□ -0.92
TOP2AP11388 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC9.28□□□□□ -0.92
TOP2AP11388 AC073869.8-201ENST00000641806 335 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 AC119674.1-217ENST00000641942 1086 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC9.28□□□□□ -0.92
TOP2AP11388 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC9.28□□□□□ -0.92
TOP2AP11388 EPS15P1-202ENST00000459691 2071 ntBASIC9.28□□□□□ -0.92
TOP2AP11388 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
TOP2AP11388 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TOP2AP11388 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOP2AP11388 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TOP2AP11388 GDA-209ENST00000545168 5362 ntTSL 2 BASIC9.27□□□□□ -0.92
TOP2AP11388 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.27□□□□□ -0.92
TOP2AP11388 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
TOP2AP11388 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
TOP2AP11388 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.27□□□□□ -0.93
TOP2AP11388 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC9.27□□□□□ -0.93
TOP2AP11388 RPL36AP15-201ENST00000444514 266 ntBASIC9.27□□□□□ -0.93
TOP2AP11388 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC9.27□□□□□ -0.93
TOP2AP11388 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC9.27□□□□□ -0.93
TOP2AP11388 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.27□□□□□ -0.93
TOP2AP11388 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.27□□□□□ -0.93
TOP2AP11388 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC9.27□□□□□ -0.93
TOP2AP11388 RNA5SP43-201ENST00000516559 110 ntBASIC9.27□□□□□ -0.93
TOP2AP11388 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC9.27□□□□□ -0.93
TOP2AP11388 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.27□□□□□ -0.93
TOP2AP11388 EDDM3DP-201ENST00000554692 434 ntBASIC9.27□□□□□ -0.93
TOP2AP11388 UBE2FP2-201ENST00000566646 462 ntBASIC9.27□□□□□ -0.93
TOP2AP11388 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.27□□□□□ -0.93
TOP2AP11388 NBPF8-201ENST00000583271 5330 ntBASIC9.27□□□□□ -0.93
TOP2AP11388 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
TOP2AP11388 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOP2AP11388 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOP2AP11388 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOP2AP11388 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOP2AP11388 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TOP2AP11388 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TOP2AP11388 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
TOP2AP11388 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOP2AP11388 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
TOP2AP11388 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC9.26□□□□□ -0.93
TOP2AP11388 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TOP2AP11388 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC9.26□□□□□ -0.93
TOP2AP11388 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC9.26□□□□□ -0.93
TOP2AP11388 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.26□□□□□ -0.93
TOP2AP11388 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC9.26□□□□□ -0.93
TOP2AP11388 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOP2AP11388 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC9.26□□□□□ -0.93
TOP2AP11388 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TOP2AP11388 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOP2AP11388 MAPK10-371ENST00000641952 5209 ntBASIC9.26□□□□□ -0.93
TOP2AP11388 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC9.26□□□□□ -0.93
TOP2AP11388 PPIAP9-201ENST00000403866 498 ntBASIC9.26□□□□□ -0.93
TOP2AP11388 AL133482.1-201ENST00000415988 498 ntBASIC9.26□□□□□ -0.93
TOP2AP11388 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC9.26□□□□□ -0.93
TOP2AP11388 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC9.26□□□□□ -0.93
TOP2AP11388 AC008033.2-201ENST00000542626 177 ntBASIC9.26□□□□□ -0.93
TOP2AP11388 EIF3FP1-201ENST00000613970 806 ntBASIC9.26□□□□□ -0.93
TOP2AP11388 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC9.26□□□□□ -0.93
TOP2AP11388 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC9.26□□□□□ -0.93
TOP2AP11388 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC9.25□□□□□ -0.93
TOP2AP11388 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOP2AP11388 HYDIN2-203ENST00000614586 13885 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC9.25□□□□□ -0.93
TOP2AP11388 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC9.25□□□□□ -0.93
TOP2AP11388 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOP2AP11388 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TOP2AP11388 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
TOP2AP11388 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC9.25□□□□□ -0.93
TOP2AP11388 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOP2AP11388 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms