Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RN7SL727P-201ENST00000482164 296 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.96□□□□□ -1.62
FREM3P0C091 RNA5SP373-201ENST00000517271 95 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 AC126177.5-201ENST00000549599 178 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.96□□□□□ -1.62
FREM3P0C091 AL445222.1-201ENST00000607259 628 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AC004808.2-201ENST00000627965 773 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 AC110716.2-201ENST00000563865 3945 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
FREM3P0C091 AC005005.4-201ENST00000623789 16698 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
FREM3P0C091 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.96□□□□□ -1.62
FREM3P0C091 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FREM3P0C091 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.96□□□□□ -1.62
FREM3P0C091 BRWD1P3-201ENST00000428816 390 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 PGAM1P13-201ENST00000507497 754 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.96□□□□□ -1.62
FREM3P0C091 GTF2F2P1-201ENST00000511083 675 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 RN7SKP99-201ENST00000517028 307 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 OR11H3P-201ENST00000554547 982 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.96□□□□□ -1.62
FREM3P0C091 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.96□□□□□ -1.62
FREM3P0C091 AC135068.5-201ENST00000624197 983 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AC005618.4-201ENST00000625053 554 ntBASIC4.96□□□□□ -1.62
FREM3P0C091 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.96□□□□□ -1.62
FREM3P0C091 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.96□□□□□ -1.62
FREM3P0C091 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 SAMM50P1-201ENST00000455403 1399 ntBASIC4.95□□□□□ -1.62
FREM3P0C091 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
FREM3P0C091 RPL11P3-201ENST00000395256 523 ntBASIC4.95□□□□□ -1.62
FREM3P0C091 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.95□□□□□ -1.62
FREM3P0C091 TMEM183AP1-205ENST00000432739 290 ntBASIC4.95□□□□□ -1.62
FREM3P0C091 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 AL672138.1-201ENST00000450604 1015 ntBASIC4.95□□□□□ -1.62
FREM3P0C091 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.95□□□□□ -1.62
FREM3P0C091 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.95□□□□□ -1.62
FREM3P0C091 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.95□□□□□ -1.62
FREM3P0C091 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 AL021707.7-201ENST00000607991 416 ntBASIC4.95□□□□□ -1.62
FREM3P0C091 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
FREM3P0C091 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.95□□□□□ -1.62
FREM3P0C091 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FREM3P0C091 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
FREM3P0C091 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.94□□□□□ -1.62
FREM3P0C091 SNORA58B-201ENST00000364259 136 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
FREM3P0C091 DBIP1-201ENST00000401435 260 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.94□□□□□ -1.62
FREM3P0C091 RPS4XP14-201ENST00000493072 781 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 AC008953.1-201ENST00000497334 318 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.94□□□□□ -1.62
FREM3P0C091 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.94□□□□□ -1.62
FREM3P0C091 SEPT10P1-201ENST00000517342 1162 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 AC130364.2-201ENST00000528639 604 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FREM3P0C091 BLZF2P-201ENST00000553776 1130 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.94□□□□□ -1.62
FREM3P0C091 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.94□□□□□ -1.62
FREM3P0C091 SUGT1P3-202ENST00000604259 383 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 AP002505.2-201ENST00000623585 696 ntBASIC4.94□□□□□ -1.62
FREM3P0C091 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FREM3P0C091 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.94□□□□□ -1.62
FREM3P0C091 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms