Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL078621.3-201ENST00000623707 2042 ntBASIC6.06□□□□□ -1.44
TPM1P09493 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.06□□□□□ -1.44
TPM1P09493 DDX18P6-201ENST00000450119 1997 ntBASIC6.06□□□□□ -1.44
TPM1P09493 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.06□□□□□ -1.44
TPM1P09493 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TPM1P09493 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 GAPDHP24-201ENST00000328713 983 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AL159987.1-201ENST00000347911 293 ntBASIC6.06□□□□□ -1.44
TPM1P09493 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 PPIAP9-201ENST00000403866 498 ntBASIC6.06□□□□□ -1.44
TPM1P09493 GCNT1P4-201ENST00000404096 329 ntBASIC6.06□□□□□ -1.44
TPM1P09493 SETP15-201ENST00000412724 337 ntBASIC6.06□□□□□ -1.44
TPM1P09493 COX5BP7-201ENST00000414780 274 ntBASIC6.06□□□□□ -1.44
TPM1P09493 BX284632.2-201ENST00000421091 399 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM1P09493 ATP5LP2-201ENST00000440646 311 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AL512605.1-202ENST00000441919 381 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AL359955.2-201ENST00000445380 353 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM1P09493 AC021660.1-201ENST00000465006 554 ntBASIC6.06□□□□□ -1.44
TPM1P09493 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.06□□□□□ -1.44
TPM1P09493 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM1P09493 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM1P09493 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM1P09493 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.06□□□□□ -1.44
TPM1P09493 TRIM51DP-201ENST00000529746 596 ntBASIC6.06□□□□□ -1.44
TPM1P09493 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM1P09493 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.06□□□□□ -1.44
TPM1P09493 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM1P09493 LINC00556-201ENST00000569603 412 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TPM1P09493 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM1P09493 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM1P09493 AC022001.1-201ENST00000605193 268 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AC108673.3-201ENST00000609183 335 ntBASIC6.06□□□□□ -1.44
TPM1P09493 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.06□□□□□ -1.44
TPM1P09493 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.06□□□□□ -1.44
TPM1P09493 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.06□□□□□ -1.44
TPM1P09493 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.06□□□□□ -1.44
TPM1P09493 THAP12P5-201ENST00000405864 2275 ntBASIC6.06□□□□□ -1.44
TPM1P09493 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 AP000542.2-201ENST00000623199 6179 ntBASIC6.06□□□□□ -1.44
TPM1P09493 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM1P09493 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TPM1P09493 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 AC007842.1-201ENST00000597336 2039 ntBASIC6.05□□□□□ -1.44
TPM1P09493 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.05□□□□□ -1.44
TPM1P09493 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM1P09493 AC017079.1-201ENST00000333650 415 ntBASIC6.05□□□□□ -1.44
TPM1P09493 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM1P09493 RNFT1P3-201ENST00000340898 1052 ntBASIC6.05□□□□□ -1.44
TPM1P09493 RNA5SP30-201ENST00000365552 115 ntBASIC6.05□□□□□ -1.44
TPM1P09493 RPL7AP49-201ENST00000429522 581 ntBASIC6.05□□□□□ -1.44
TPM1P09493 AL591438.1-201ENST00000433508 581 ntBASIC6.05□□□□□ -1.44
TPM1P09493 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.05□□□□□ -1.44
TPM1P09493 AC016772.1-201ENST00000444170 1261 ntBASIC6.05□□□□□ -1.44
TPM1P09493 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.05□□□□□ -1.44
TPM1P09493 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM1P09493 AC023194.2-201ENST00000465398 406 ntBASIC6.05□□□□□ -1.44
TPM1P09493 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM1P09493 AC021106.1-201ENST00000509020 1058 ntBASIC6.05□□□□□ -1.44
TPM1P09493 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM1P09493 RNU2-45P-201ENST00000516068 187 ntBASIC6.05□□□□□ -1.44
TPM1P09493 RN7SKP35-201ENST00000517210 151 ntBASIC6.05□□□□□ -1.44
TPM1P09493 CDC42P3-201ENST00000518493 633 ntBASIC6.05□□□□□ -1.44
TPM1P09493 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.05□□□□□ -1.44
TPM1P09493 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM1P09493 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM1P09493 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM1P09493 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.05□□□□□ -1.44
TPM1P09493 AC040958.1-201ENST00000561102 201 ntBASIC6.05□□□□□ -1.44
TPM1P09493 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TPM1P09493 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.05□□□□□ -1.44
TPM1P09493 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TPM1P09493 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM1P09493 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.05□□□□□ -1.44
TPM1P09493 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 AC025574.1-201ENST00000554784 1653 ntBASIC6.04□□□□□ -1.44
TPM1P09493 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TPM1P09493 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TPM1P09493 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 AC211486.3-201ENST00000412694 621 ntBASIC6.04□□□□□ -1.44
TPM1P09493 PCNPP4-201ENST00000414817 517 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms