Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SLC25A51P1-201ENST00000468432 871 ntBASIC6.23□□□□□ -1.41
MMP3P08254 RN7SL826P-201ENST00000479724 288 ntBASIC6.23□□□□□ -1.41
MMP3P08254 NDUFA5P12-201ENST00000503796 343 ntBASIC6.23□□□□□ -1.41
MMP3P08254 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.23□□□□□ -1.41
MMP3P08254 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.23□□□□□ -1.41
MMP3P08254 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 AL163952.1-202ENST00000569625 600 ntBASIC6.23□□□□□ -1.41
MMP3P08254 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 RPSAP73-201ENST00000614820 330 ntBASIC6.23□□□□□ -1.41
MMP3P08254 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.23□□□□□ -1.41
MMP3P08254 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 CASC19-222ENST00000641321 1173 ntBASIC6.23□□□□□ -1.41
MMP3P08254 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MMP3P08254 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.22□□□□□ -1.41
MMP3P08254 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.22□□□□□ -1.41
MMP3P08254 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
MMP3P08254 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 MTCO1P22-201ENST00000604619 1360 ntBASIC6.22□□□□□ -1.41
MMP3P08254 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 CASC19-243ENST00000641588 1546 ntBASIC6.22□□□□□ -1.41
MMP3P08254 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MMP3P08254 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.22□□□□□ -1.41
MMP3P08254 AC005294.1-201ENST00000355509 281 ntBASIC6.22□□□□□ -1.41
MMP3P08254 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 RNA5SP507-201ENST00000363603 121 ntBASIC6.22□□□□□ -1.41
MMP3P08254 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 METTL15P3-201ENST00000415522 1221 ntBASIC6.22□□□□□ -1.41
MMP3P08254 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.22□□□□□ -1.41
MMP3P08254 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.22□□□□□ -1.41
MMP3P08254 AC092106.1-201ENST00000444291 373 ntBASIC6.22□□□□□ -1.41
MMP3P08254 RPS7P6-201ENST00000485777 579 ntBASIC6.22□□□□□ -1.41
MMP3P08254 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.22□□□□□ -1.41
MMP3P08254 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.22□□□□□ -1.41
MMP3P08254 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.22□□□□□ -1.41
MMP3P08254 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.22□□□□□ -1.41
MMP3P08254 NANOGP3-201ENST00000605855 286 ntBASIC6.22□□□□□ -1.41
MMP3P08254 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.22□□□□□ -1.41
MMP3P08254 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.22□□□□□ -1.41
MMP3P08254 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.22□□□□□ -1.41
MMP3P08254 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MMP3P08254 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.22□□□□□ -1.41
MMP3P08254 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MMP3P08254 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MMP3P08254 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MMP3P08254 OFD1P17-201ENST00000437639 3018 ntBASIC6.22□□□□□ -1.41
MMP3P08254 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MMP3P08254 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
MMP3P08254 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MMP3P08254 CCAT2-201ENST00000630920 1752 ntBASIC6.21□□□□□ -1.41
MMP3P08254 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
MMP3P08254 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
MMP3P08254 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 MIR133B-201ENST00000362210 119 ntBASIC6.21□□□□□ -1.42
MMP3P08254 U3.2-201ENST00000362981 210 ntBASIC6.21□□□□□ -1.42
MMP3P08254 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.21□□□□□ -1.42
MMP3P08254 AL645927.1-201ENST00000396783 406 ntBASIC6.21□□□□□ -1.42
MMP3P08254 RPL23AP27-201ENST00000415161 451 ntBASIC6.21□□□□□ -1.42
MMP3P08254 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.21□□□□□ -1.42
MMP3P08254 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.21□□□□□ -1.42
MMP3P08254 AC105399.1-202ENST00000447303 205 ntBASIC6.21□□□□□ -1.42
MMP3P08254 AP002371.1-201ENST00000463604 433 ntBASIC6.21□□□□□ -1.42
MMP3P08254 RN7SL447P-201ENST00000494711 245 ntBASIC6.21□□□□□ -1.42
MMP3P08254 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.21□□□□□ -1.42
MMP3P08254 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.21□□□□□ -1.42
MMP3P08254 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 AL513327.3-201ENST00000602618 469 ntBASIC6.21□□□□□ -1.42
MMP3P08254 AL445222.1-201ENST00000607259 628 ntBASIC6.21□□□□□ -1.42
MMP3P08254 AL356094.1-201ENST00000624663 1212 ntBASIC6.21□□□□□ -1.42
MMP3P08254 MAPK10-350ENST00000641777 965 ntBASIC6.21□□□□□ -1.42
MMP3P08254 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
MMP3P08254 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms