Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
RETP07949 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RETP07949 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.8□□□□□ -1.48
RETP07949 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RETP07949 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RETP07949 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.8□□□□□ -1.48
RETP07949 SNORA56-201ENST00000383966 129 ntBASIC5.8□□□□□ -1.48
RETP07949 RMRPP5-201ENST00000411156 267 ntBASIC5.8□□□□□ -1.48
RETP07949 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.8□□□□□ -1.48
RETP07949 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.8□□□□□ -1.48
RETP07949 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.8□□□□□ -1.48
RETP07949 RPL7L1P9-201ENST00000431298 745 ntBASIC5.8□□□□□ -1.48
RETP07949 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RETP07949 AURKAPS1-201ENST00000451805 1212 ntBASIC5.8□□□□□ -1.48
RETP07949 RANP1-206ENST00000455094 651 ntBASIC5.8□□□□□ -1.48
RETP07949 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.8□□□□□ -1.48
RETP07949 OSTCP1-201ENST00000455507 450 ntBASIC5.8□□□□□ -1.48
RETP07949 AC104164.1-201ENST00000460282 590 ntBASIC5.8□□□□□ -1.48
RETP07949 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.8□□□□□ -1.48
RETP07949 RPS4XP1-201ENST00000482189 787 ntBASIC5.8□□□□□ -1.48
RETP07949 TRBV5-2-201ENST00000489095 273 ntBASIC5.8□□□□□ -1.48
RETP07949 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.8□□□□□ -1.48
RETP07949 SCARNA6.1-201ENST00000516989 238 ntBASIC5.8□□□□□ -1.48
RETP07949 MRPS16P1-201ENST00000523462 412 ntBASIC5.8□□□□□ -1.48
RETP07949 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.8□□□□□ -1.48
RETP07949 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
RETP07949 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.8□□□□□ -1.48
RETP07949 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.8□□□□□ -1.48
RETP07949 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.8□□□□□ -1.48
RETP07949 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.8□□□□□ -1.48
RETP07949 TXNP4-201ENST00000575018 310 ntBASIC5.8□□□□□ -1.48
RETP07949 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.8□□□□□ -1.48
RETP07949 AC012557.1-201ENST00000607115 611 ntBASIC5.8□□□□□ -1.48
RETP07949 AC105105.5-201ENST00000622635 1294 ntBASIC5.8□□□□□ -1.48
RETP07949 AL390318.1-201ENST00000624564 687 ntBASIC5.8□□□□□ -1.48
RETP07949 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.8□□□□□ -1.48
RETP07949 AC000095.2-202ENST00000637415 154 ntBASIC5.8□□□□□ -1.48
RETP07949 AC073869.7-201ENST00000640874 297 ntBASIC5.8□□□□□ -1.48
RETP07949 MAPK10-350ENST00000641777 965 ntBASIC5.8□□□□□ -1.48
RETP07949 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RETP07949 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.8□□□□□ -1.48
RETP07949 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.8□□□□□ -1.48
RETP07949 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RETP07949 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RETP07949 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RETP07949 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.8□□□□□ -1.48
RETP07949 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RETP07949 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.79□□□□□ -1.48
RETP07949 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RETP07949 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.79□□□□□ -1.48
RETP07949 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.79□□□□□ -1.48
RETP07949 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.79□□□□□ -1.48
RETP07949 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 SRRM1P3-201ENST00000426911 2678 ntBASIC5.79□□□□□ -1.48
RETP07949 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.79□□□□□ -1.48
RETP07949 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RETP07949 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.79□□□□□ -1.48
RETP07949 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.79□□□□□ -1.48
RETP07949 RPS3AP38-201ENST00000435889 763 ntBASIC5.79□□□□□ -1.48
RETP07949 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.79□□□□□ -1.48
RETP07949 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.79□□□□□ -1.48
RETP07949 RPL23AP60-201ENST00000450011 454 ntBASIC5.79□□□□□ -1.48
RETP07949 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.79□□□□□ -1.48
RETP07949 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
RETP07949 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.79□□□□□ -1.48
RETP07949 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.79□□□□□ -1.48
RETP07949 AP000676.2-201ENST00000529711 301 ntBASIC5.79□□□□□ -1.48
RETP07949 CR383656.6-201ENST00000550518 394 ntBASIC5.79□□□□□ -1.48
RETP07949 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.79□□□□□ -1.48
RETP07949 RNU4ATAC-201ENST00000580972 127 ntBASIC5.79□□□□□ -1.48
RETP07949 AP001357.1-201ENST00000586304 1053 ntBASIC5.79□□□□□ -1.48
RETP07949 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.79□□□□□ -1.48
RETP07949 ELOCP28-201ENST00000590044 317 ntBASIC5.79□□□□□ -1.48
RETP07949 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.79□□□□□ -1.48
RETP07949 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.79□□□□□ -1.48
RETP07949 AC136428.4-201ENST00000634254 1155 ntBASIC5.79□□□□□ -1.48
RETP07949 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.79□□□□□ -1.48
RETP07949 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RETP07949 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RETP07949 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RETP07949 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RETP07949 AP002512.4-202ENST00000641599 4530 ntBASIC5.78□□□□□ -1.48
RETP07949 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RETP07949 AL355488.2-201ENST00000609909 2850 ntBASIC5.78□□□□□ -1.48
RETP07949 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.78□□□□□ -1.48
RETP07949 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.78□□□□□ -1.48
RETP07949 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.78□□□□□ -1.48
RETP07949 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RETP07949 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
RETP07949 RNA5SP183-201ENST00000362452 119 ntBASIC5.78□□□□□ -1.48
RETP07949 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.78□□□□□ -1.48
RETP07949 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms