Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL139407.1-201ENST00000613826 1175 ntBASIC6.14□□□□□ -1.43
RB1P06400 WBP1LP8-201ENST00000617401 327 ntBASIC6.14□□□□□ -1.43
RB1P06400 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.14□□□□□ -1.43
RB1P06400 AC136428.4-201ENST00000634254 1155 ntBASIC6.14□□□□□ -1.43
RB1P06400 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RB1P06400 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RB1P06400 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.14□□□□□ -1.43
RB1P06400 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.14□□□□□ -1.43
RB1P06400 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RB1P06400 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RB1P06400 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.14□□□□□ -1.43
RB1P06400 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.14□□□□□ -1.43
RB1P06400 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RB1P06400 AC006511.3-201ENST00000624929 1783 ntBASIC6.13□□□□□ -1.43
RB1P06400 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RB1P06400 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RB1P06400 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.13□□□□□ -1.43
RB1P06400 AC087516.1-201ENST00000561236 2428 ntBASIC6.13□□□□□ -1.43
RB1P06400 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RB1P06400 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.13□□□□□ -1.43
RB1P06400 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RB1P06400 AC007068.1-201ENST00000396690 844 ntBASIC6.13□□□□□ -1.43
RB1P06400 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 Y_RNA.625-201ENST00000411256 107 ntBASIC6.13□□□□□ -1.43
RB1P06400 RPL35AP24-201ENST00000413846 330 ntBASIC6.13□□□□□ -1.43
RB1P06400 AC007568.1-201ENST00000422912 471 ntBASIC6.13□□□□□ -1.43
RB1P06400 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 RAB9AP5-201ENST00000437794 597 ntBASIC6.13□□□□□ -1.43
RB1P06400 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.13□□□□□ -1.43
RB1P06400 RPL12P3-201ENST00000440080 396 ntBASIC6.13□□□□□ -1.43
RB1P06400 RAB9AP2-201ENST00000443911 597 ntBASIC6.13□□□□□ -1.43
RB1P06400 CEACAMP7-201ENST00000444105 496 ntBASIC6.13□□□□□ -1.43
RB1P06400 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.13□□□□□ -1.43
RB1P06400 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.13□□□□□ -1.43
RB1P06400 NDUFB5P1-201ENST00000508134 564 ntBASIC6.13□□□□□ -1.43
RB1P06400 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.13□□□□□ -1.43
RB1P06400 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.13□□□□□ -1.43
RB1P06400 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.13□□□□□ -1.43
RB1P06400 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.13□□□□□ -1.43
RB1P06400 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.13□□□□□ -1.43
RB1P06400 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.13□□□□□ -1.43
RB1P06400 AC009268.1-201ENST00000561352 1203 ntBASIC6.13□□□□□ -1.43
RB1P06400 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.13□□□□□ -1.43
RB1P06400 OR4H6P-201ENST00000563771 921 ntBASIC6.13□□□□□ -1.43
RB1P06400 RN7SL708P-201ENST00000580952 299 ntBASIC6.13□□□□□ -1.43
RB1P06400 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.13□□□□□ -1.43
RB1P06400 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 PPATP2-201ENST00000605635 508 ntBASIC6.13□□□□□ -1.43
RB1P06400 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 MIR6748-201ENST00000610433 71 ntBASIC6.13□□□□□ -1.43
RB1P06400 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RB1P06400 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RB1P06400 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RB1P06400 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RB1P06400 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RB1P06400 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.13□□□□□ -1.43
RB1P06400 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RB1P06400 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.13□□□□□ -1.43
RB1P06400 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.13□□□□□ -1.43
RB1P06400 AC093297.3-201ENST00000607056 2517 ntBASIC6.13□□□□□ -1.43
RB1P06400 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RB1P06400 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RB1P06400 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RB1P06400 AC005294.1-201ENST00000355509 281 ntBASIC6.12□□□□□ -1.43
RB1P06400 RN7SKP28-201ENST00000364770 305 ntBASIC6.12□□□□□ -1.43
RB1P06400 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RB1P06400 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.12□□□□□ -1.43
RB1P06400 MIR765-201ENST00000390226 114 ntBASIC6.12□□□□□ -1.43
RB1P06400 MIR550A3-201ENST00000390735 95 ntBASIC6.12□□□□□ -1.43
RB1P06400 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RB1P06400 OR2W4P-201ENST00000406496 926 ntBASIC6.12□□□□□ -1.43
RB1P06400 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.12□□□□□ -1.43
RB1P06400 RN7SKP151-201ENST00000410230 316 ntBASIC6.12□□□□□ -1.43
RB1P06400 RPL23AP18-201ENST00000416139 468 ntBASIC6.12□□□□□ -1.43
RB1P06400 VN1R31P-201ENST00000417498 730 ntBASIC6.12□□□□□ -1.43
RB1P06400 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.12□□□□□ -1.43
RB1P06400 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 NIPA2P1-201ENST00000426223 976 ntBASIC6.12□□□□□ -1.43
RB1P06400 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.12□□□□□ -1.43
RB1P06400 AC079922.1-201ENST00000443291 359 ntBASIC6.12□□□□□ -1.43
RB1P06400 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.12□□□□□ -1.43
RB1P06400 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 CBX1P5-201ENST00000475330 559 ntBASIC6.12□□□□□ -1.43
RB1P06400 RPS4XP1-201ENST00000482189 787 ntBASIC6.12□□□□□ -1.43
RB1P06400 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RB1P06400 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.12□□□□□ -1.43
RB1P06400 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 AC022832.1-201ENST00000530718 645 ntBASIC6.12□□□□□ -1.43
RB1P06400 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.12□□□□□ -1.43
RB1P06400 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RB1P06400 AC126615.2-201ENST00000553003 515 ntBASIC6.12□□□□□ -1.43
RB1P06400 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
RB1P06400 AC125494.2-201ENST00000602431 657 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms