Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 FABP5P6-201ENST00000510588 409 ntBASIC5.33□□□□□ -1.56
SSX4O60224 SETP12-201ENST00000514068 805 ntBASIC5.33□□□□□ -1.56
SSX4O60224 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 IGKV3D-25-201ENST00000519599 235 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX4O60224 AC027026.1-201ENST00000532323 742 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.33□□□□□ -1.56
SSX4O60224 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
SSX4O60224 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.33□□□□□ -1.56
SSX4O60224 AC012146.2-201ENST00000576545 416 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC027216.1-201ENST00000577726 685 ntBASIC5.33□□□□□ -1.56
SSX4O60224 MIR4701-201ENST00000583094 63 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.33□□□□□ -1.56
SSX4O60224 AL133247.2-201ENST00000603236 482 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC005972.3-201ENST00000606304 481 ntBASIC5.33□□□□□ -1.56
SSX4O60224 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 RMST_5.1-201ENST00000618704 126 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL133370.2-201ENST00000619934 439 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC024884.1-201ENST00000620583 399 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL356490.1-201ENST00000623079 479 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AP003499.2-201ENST00000624100 483 ntBASIC5.33□□□□□ -1.56
SSX4O60224 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 MIR4302-201ENST00000638058 60 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 MTND5P23-201ENST00000430812 1655 ntBASIC5.33□□□□□ -1.56
SSX4O60224 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
SSX4O60224 AL591135.1-201ENST00000401578 5914 ntBASIC5.33□□□□□ -1.56
SSX4O60224 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSX4O60224 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSX4O60224 RN7SKP145-201ENST00000363291 303 ntBASIC5.32□□□□□ -1.56
SSX4O60224 RNU6-1251P-201ENST00000364502 107 ntBASIC5.32□□□□□ -1.56
SSX4O60224 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 MIR130B-202ENST00000385018 82 ntBASIC5.32□□□□□ -1.56
SSX4O60224 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 AL445238.1-204ENST00000400311 463 ntBASIC5.32□□□□□ -1.56
SSX4O60224 LYPLA1P3-201ENST00000402650 695 ntBASIC5.32□□□□□ -1.56
SSX4O60224 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 AL357078.2-201ENST00000416486 427 ntBASIC5.32□□□□□ -1.56
SSX4O60224 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 AC012497.1-201ENST00000429392 575 ntBASIC5.32□□□□□ -1.56
SSX4O60224 AL138787.1-202ENST00000437804 898 ntBASIC5.32□□□□□ -1.56
SSX4O60224 AL157884.3-201ENST00000448273 1184 ntBASIC5.32□□□□□ -1.56
SSX4O60224 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.32□□□□□ -1.56
SSX4O60224 RN7SL326P-201ENST00000477493 296 ntBASIC5.32□□□□□ -1.56
SSX4O60224 RPL34P33-201ENST00000486062 334 ntBASIC5.32□□□□□ -1.56
SSX4O60224 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.32□□□□□ -1.56
SSX4O60224 AL158068.1-201ENST00000506116 616 ntBASIC5.32□□□□□ -1.56
SSX4O60224 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 AC106800.3-201ENST00000511389 308 ntBASIC5.32□□□□□ -1.56
SSX4O60224 PRMT5P1-201ENST00000514351 598 ntBASIC5.32□□□□□ -1.56
SSX4O60224 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 snoU109.5-201ENST00000516231 132 ntBASIC5.32□□□□□ -1.56
SSX4O60224 RNU6-889P-201ENST00000517189 103 ntBASIC5.32□□□□□ -1.56
SSX4O60224 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 AP003396.4-201ENST00000527574 265 ntBASIC5.32□□□□□ -1.56
SSX4O60224 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 MIR3614-201ENST00000581261 86 ntBASIC5.32□□□□□ -1.56
SSX4O60224 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.32□□□□□ -1.56
SSX4O60224 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.32□□□□□ -1.56
SSX4O60224 AC096708.4-201ENST00000620563 552 ntBASIC5.32□□□□□ -1.56
SSX4O60224 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX4O60224 FO681491.1-202ENST00000623392 737 ntBASIC5.32□□□□□ -1.56
SSX4O60224 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms