Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 C4BPAP1-201ENST00000415474 1893 ntBASIC5.73□□□□□ -1.49
NEDD8-MDP1E9PL57 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AL121839.2-201ENST00000565058 6943 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 ZNF101P1-201ENST00000435701 1720 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 LINC01963-201ENST00000562038 3148 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RPL11P3-201ENST00000395256 523 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RPS26P38-201ENST00000414476 348 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RPL7L1P9-201ENST00000431298 745 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RPL12P39-201ENST00000455456 496 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RPL7P45-201ENST00000455851 743 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RN7SL515P-201ENST00000463999 297 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RPL7P39-201ENST00000481157 744 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AC004825.1-201ENST00000555068 586 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 DHFRP1-201ENST00000579682 559 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AC087821.1-201ENST00000623639 567 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 SAMMSON-209ENST00000641222 1100 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 AL590763.1-201ENST00000398297 1545 ntBASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD8-MDP1E9PL57 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.71□□□□□ -1.49
NEDD8-MDP1E9PL57 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.71□□□□□ -1.49
NEDD8-MDP1E9PL57 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.71□□□□□ -1.49
NEDD8-MDP1E9PL57 AL592429.1-201ENST00000403909 1473 ntBASIC5.71□□□□□ -1.49
NEDD8-MDP1E9PL57 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.71□□□□□ -1.49
NEDD8-MDP1E9PL57 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
NEDD8-MDP1E9PL57 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AC144833.1-201ENST00000567953 4089 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 TMEM183AP1-205ENST00000432739 290 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 USP24P1-201ENST00000433802 779 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 BX679664.2-201ENST00000439282 283 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 RN7SL30P-201ENST00000488416 306 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AC078878.1-201ENST00000539832 958 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AC023389.2-201ENST00000580031 955 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 MIR4443-201ENST00000585052 53 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AL512329.2-201ENST00000607350 548 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AC000068.2-201ENST00000608816 460 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AP003072.5-201ENST00000623872 773 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 PABPC1P6-201ENST00000445594 1829 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 MT-RNR2-201ENST00000387347 1559 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 AL360270.2-201ENST00000562952 5985 ntBASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD8-MDP1E9PL57 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 AL009179.1-201ENST00000406085 265 ntBASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 AL627308.1-201ENST00000435693 821 ntBASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 AC092106.1-201ENST00000444291 373 ntBASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 SEPT14P1-201ENST00000458703 648 ntBASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD8-MDP1E9PL57 AC024558.1-201ENST00000505008 528 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms