Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AC072052.1-201ENST00000496556 306 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 CCNHP1-201ENST00000513311 678 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 BNIP3P40-201ENST00000596017 556 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 KATNBL1P1-201ENST00000605192 748 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AL139099.4-201ENST00000614802 114 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AC022306.3-201ENST00000619930 550 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AC136428.4-201ENST00000634254 1155 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 LINC01616-201ENST00000561816 2280 ntBASIC5.74□□□□□ -1.49
C4orf47A7E2U8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.74□□□□□ -1.49
C4orf47A7E2U8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC006511.3-201ENST00000624929 1783 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 RNA5SP319-201ENST00000362768 119 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 SNORA56-201ENST00000383966 129 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 RNU11-6P-201ENST00000391127 133 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AL645733.1-201ENST00000402250 217 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 CBX1P3-201ENST00000413296 527 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MTND4P11-201ENST00000417020 1058 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 SLC35E1P1-201ENST00000419313 864 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MTCYBP15-201ENST00000433123 1127 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AL590399.4-201ENST00000436561 601 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AL450996.1-201ENST00000445574 1202 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MTND2P25-201ENST00000449028 610 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 CBX1P2-201ENST00000453841 458 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC104164.1-201ENST00000460282 590 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MRE11P1-201ENST00000464884 2127 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 FTH1P2-201ENST00000466086 412 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 RN7SL583P-201ENST00000475692 287 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 RN7SL165P-201ENST00000477476 291 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MRPS16P1-201ENST00000523462 412 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 RBM22P12-201ENST00000567098 1255 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MIR4301-201ENST00000577203 66 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AL357094.1-201ENST00000603845 844 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC004836.1-201ENST00000623032 634 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AL390318.1-201ENST00000624564 687 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 AC097655.1-201ENST00000635075 318 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.73□□□□□ -1.49
C4orf47A7E2U8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
C4orf47A7E2U8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C4orf47A7E2U8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C4orf47A7E2U8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C4orf47A7E2U8 AC009779.8-201ENST00000641684 4384 ntBASIC5.72□□□□□ -1.49
C4orf47A7E2U8 AC024341.1-201ENST00000526444 1552 ntBASIC5.72□□□□□ -1.49
C4orf47A7E2U8 AC011369.2-201ENST00000624423 1567 ntBASIC5.72□□□□□ -1.49
C4orf47A7E2U8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.72□□□□□ -1.49
C4orf47A7E2U8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C4orf47A7E2U8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms