Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SHISA3A0PJX4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SHISA3A0PJX4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHISA3A0PJX4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHISA3A0PJX4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC005618.1-201ENST00000606901 3148 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 MARK2P10-201ENST00000454959 1437 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 KYNUP1-201ENST00000466683 1406 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 RPL10P16-201ENST00000325000 645 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 Y_RNA.582-201ENST00000391023 95 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 HMGB3P1-201ENST00000393368 573 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 RPSAP42-201ENST00000403415 878 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC231533.2-201ENST00000419045 978 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 EEF1GP7-201ENST00000422983 703 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 OR8F1P-201ENST00000425243 930 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC068137.1-201ENST00000429272 584 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 NANOGNBP1-201ENST00000448444 480 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 DBIL5P-202ENST00000453414 250 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC073610.1-201ENST00000489971 396 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC063943.2-201ENST00000495697 534 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC131392.1-201ENST00000506490 633 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC138866.2-201ENST00000508650 584 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC117522.1-201ENST00000509821 380 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 GUSBP9-201ENST00000510138 584 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 PGAM4P2-201ENST00000512491 721 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 IGJP1-201ENST00000522682 475 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC135983.3-201ENST00000528049 1226 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC109635.3-201ENST00000529536 185 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC087280.1-201ENST00000530632 1003 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AP004247.1-201ENST00000531556 1289 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 DNM1P31-201ENST00000564149 696 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 TUBAP4-201ENST00000569261 416 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 MIR4528-201ENST00000577763 90 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AP005262.1-201ENST00000582646 997 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 SYPL1P2-201ENST00000582878 727 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC104184.1-201ENST00000607513 721 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 RN7SL3-201ENST00000610674 299 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 uc_338.33-201ENST00000614988 170 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC063943.3-201ENST00000615562 356 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 FAM74A6-203ENST00000615956 481 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC005383.1-201ENST00000622689 534 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC073862.4-201ENST00000622982 854 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 U6.107-201ENST00000637108 79 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AC100871.1-201ENST00000507871 1456 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 AL513523.1-201ENST00000417868 1309 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 KYNUP3-201ENST00000574386 1341 ntBASIC6.2□□□□□ -1.42
SHISA3A0PJX4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHISA3A0PJX4 MTND4P23-201ENST00000447723 1363 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms