Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC133552.3-201ENST00000572236 1869 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 Y_RNA.142-201ENST00000363491 102 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 RNA5SP378-201ENST00000363646 120 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 SSX9-201ENST00000376909 591 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 MIR431-201ENST00000385266 114 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 RPS24P12-201ENST00000402084 394 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL355375.1-201ENST00000405686 392 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 NACAP7-201ENST00000407371 609 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 PRELID1P2-201ENST00000407805 396 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 RPS3AP9-201ENST00000417027 792 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL512882.1-201ENST00000436086 832 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 RPL7P11-201ENST00000437586 658 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC027124.1-201ENST00000440852 466 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL161454.1-201ENST00000446226 569 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 TCEAL4P1-201ENST00000453620 588 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC087312.1-201ENST00000471411 480 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC091544.1-201ENST00000484702 348 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 RN7SL182P-201ENST00000496499 300 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC021678.1-201ENST00000505195 936 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL049869.4-201ENST00000555669 178 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC087477.6-201ENST00000559595 843 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL121655.1-201ENST00000605811 308 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC139426.3-201ENST00000605648 2059 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 Z93929.1-201ENST00000418200 1475 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AL162171.3-201ENST00000617439 3178 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AL512662.1-201ENST00000624850 2251 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC079097.1-201ENST00000512187 1399 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RNA5SP389-201ENST00000362610 115 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RNA5SP226-201ENST00000362653 115 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SNORA51.7-201ENST00000384171 134 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RNU6-98P-201ENST00000384173 107 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RPS3AP3-201ENST00000411933 242 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 OR51A3P-201ENST00000413596 924 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RPL12P27-201ENST00000414870 496 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AL138479.1-201ENST00000426913 484 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RPL37P21-201ENST00000435890 276 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RABEPKP1-201ENST00000440529 1026 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC092570.2-201ENST00000452117 1143 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SULT1D1P-201ENST00000458020 882 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 RPS18P13-201ENST00000461260 454 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC010307.1-201ENST00000467206 836 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC099521.1-201ENST00000482557 334 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC111000.3-201ENST00000508057 576 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC026412.2-201ENST00000512270 1075 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 ARL2BPP5-201ENST00000523141 481 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AP004607.5-201ENST00000532034 217 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 OR5AN2P-201ENST00000534535 896 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms