Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC007342.7-201ENST00000624610 2337 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 HSPD1P9-201ENST00000420325 1636 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 Y_RNA.408-201ENST00000383987 102 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC017078.1-201ENST00000416146 368 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 FTH1P5-201ENST00000425761 545 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC093155.1-201ENST00000440164 826 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 GAPDHP20-201ENST00000444107 1007 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC003071.1-201ENST00000451219 789 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC092001.1-201ENST00000453012 261 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 H3F3AP5-201ENST00000475267 429 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC072039.1-201ENST00000477611 581 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 RN7SL654P-201ENST00000479178 292 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC147055.4-201ENST00000504399 745 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 RNU6-506P-201ENST00000516553 94 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 SNORA31.13-201ENST00000516624 135 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 RNA5SP278-201ENST00000517055 102 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 ZNF519P2-201ENST00000557032 169 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC068276.1-201ENST00000605793 379 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AL159169.3-201ENST00000608871 561 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC007014.2-201ENST00000615581 479 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC009704.2-201ENST00000618739 483 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC135068.5-201ENST00000624197 983 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC073869.7-201ENST00000640874 297 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AL121657.1-201ENST00000327215 531 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 FGF7P2-201ENST00000332473 296 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 SNORA72.1-201ENST00000363485 129 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 LCN1P2-201ENST00000372030 223 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 CYCSP46-201ENST00000423569 204 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 RWDD4P2-201ENST00000426392 563 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 TRIM60P18-201ENST00000441518 828 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 RPSAP39-201ENST00000467439 883 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 CCDC75P1-201ENST00000469247 791 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC004924.1-201ENST00000480160 781 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 RN7SL88P-201ENST00000480166 299 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 RN7SL413P-201ENST00000482700 297 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 RN7SL797P-201ENST00000486314 297 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 ARL2BPP4-201ENST00000506854 471 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC117522.1-201ENST00000509821 380 ntBASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC8.51□□□□□ -1.05
ZC3H4Q9UPT8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms