Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 U3.3-201ENST00000362986 216 ntBASIC6.9□□□□□ -1.31
SCN11AQ9UI33 AL139128.1-201ENST00000413921 941 ntBASIC6.9□□□□□ -1.31
SCN11AQ9UI33 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 REG1CP-206ENST00000447469 496 ntBASIC6.9□□□□□ -1.31
SCN11AQ9UI33 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.31
SCN11AQ9UI33 AC011447.4-201ENST00000587562 111 ntBASIC6.9□□□□□ -1.31
SCN11AQ9UI33 uc_338.18-201ENST00000615451 175 ntBASIC6.9□□□□□ -1.31
SCN11AQ9UI33 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 UGT2B24P-201ENST00000514441 1597 ntBASIC6.89□□□□□ -1.31
SCN11AQ9UI33 CASC19-281ENST00000642118 1554 ntBASIC6.89□□□□□ -1.31
SCN11AQ9UI33 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 FAR2P2-201ENST00000413041 594 ntBASIC6.89□□□□□ -1.31
SCN11AQ9UI33 FAR2P4-202ENST00000425399 584 ntBASIC6.89□□□□□ -1.31
SCN11AQ9UI33 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 MIR4480-201ENST00000582492 71 ntBASIC6.89□□□□□ -1.31
SCN11AQ9UI33 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 FAM25E-202ENST00000608562 189 ntBASIC6.89□□□□□ -1.31
SCN11AQ9UI33 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN11AQ9UI33 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 PPIAP9-201ENST00000403866 498 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 AL360081.1-201ENST00000428299 555 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 BX679664.2-201ENST00000439282 283 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 RN7SKP147-201ENST00000517154 244 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 AP001357.1-201ENST00000586304 1053 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 AC005252.1-201ENST00000604518 1063 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 AC114774.1-201ENST00000507410 1770 ntBASIC6.88□□□□□ -1.31
SCN11AQ9UI33 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN11AQ9UI33 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AC105233.1-201ENST00000498840 781 ntBASIC6.87□□□□□ -1.31
SCN11AQ9UI33 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AC011840.5-201ENST00000582125 771 ntBASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 NXF4-202ENST00000416098 1465 ntBASIC6.87□□□□□ -1.31
SCN11AQ9UI33 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 NBPF8-201ENST00000583271 5330 ntBASIC6.87□□□□□ -1.31
SCN11AQ9UI33 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 KYNUP3-201ENST00000574386 1341 ntBASIC6.87□□□□□ -1.31
SCN11AQ9UI33 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 AC026951.1-201ENST00000559530 2459 ntBASIC6.87□□□□□ -1.31
SCN11AQ9UI33 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN11AQ9UI33 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms