Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC004656.1-201ENST00000568479 4951 ntBASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.78□□□□□ -1.48
TM9SF3Q9HD45 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
TM9SF3Q9HD45 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 RN7SKP59-201ENST00000410520 314 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AL354766.1-201ENST00000423396 542 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 CFL1P1-202ENST00000432948 411 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 USP24P1-201ENST00000433802 779 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AL627308.1-201ENST00000435693 821 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AC012075.1-201ENST00000436549 580 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 RPS12P17-201ENST00000438591 377 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AL663074.2-201ENST00000440621 479 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 FRG2FP-204ENST00000453982 852 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 ACA64.4-201ENST00000459070 127 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AL157777.1-201ENST00000468100 304 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AL358913.1-201ENST00000554342 121 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AP002884.5-201ENST00000595053 1132 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AC007204.2-201ENST00000615022 616 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 AC074140.1-201ENST00000621617 208 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 YES1P1-201ENST00000418510 1628 ntBASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF3Q9HD45 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 LINC02019-201ENST00000608605 2060 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 GAPDHP24-201ENST00000328713 983 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 RPS3AP38-201ENST00000435889 763 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 KRT8P51-201ENST00000438938 274 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AC023141.8-201ENST00000442554 208 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AC007386.1-201ENST00000455212 582 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 MRPS16P1-201ENST00000523462 412 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 MIR1269B-201ENST00000580405 75 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AC079776.5-201ENST00000641920 211 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 SRRM1P3-201ENST00000426911 2678 ntBASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.76□□□□□ -1.49
TM9SF3Q9HD45 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 HSPD1P7-201ENST00000447985 1686 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AL121839.2-201ENST00000565058 6943 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms