Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RAD17P2-201ENST00000451754 1977 ntBASIC7.09□□□□□ -1.28
ABCA3Q99758 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.09□□□□□ -1.28
ABCA3Q99758 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
ABCA3Q99758 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
ABCA3Q99758 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 SNORD1C-201ENST00000363315 78 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 AC008171.1-201ENST00000395058 200 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 AC096921.1-201ENST00000411661 375 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 RPL18P10-201ENST00000425606 538 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 USP24P1-201ENST00000433802 779 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 RNF138P2-201ENST00000603490 592 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 AC008814.1-201ENST00000603797 406 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 AC005377.1-201ENST00000605126 456 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 AL133481.2-203ENST00000607558 139 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 OR4F13P-202ENST00000560066 2054 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.08□□□□□ -1.28
ABCA3Q99758 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
ABCA3Q99758 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
ABCA3Q99758 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.08□□□□□ -1.28
ABCA3Q99758 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.08□□□□□ -1.28
ABCA3Q99758 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 WBP11P1-201ENST00000562560 1931 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 RNU1-136P-201ENST00000384181 164 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ABCA3Q99758 CHEK2P3-201ENST00000416118 248 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 AC092570.3-201ENST00000420113 693 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.07□□□□□ -1.28
ABCA3Q99758 FTH1P8-201ENST00000498161 514 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
ABCA3Q99758 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.07□□□□□ -1.28
ABCA3Q99758 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.07□□□□□ -1.28
ABCA3Q99758 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.07□□□□□ -1.28
ABCA3Q99758 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.07□□□□□ -1.28
ABCA3Q99758 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
ABCA3Q99758 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 RPL32P3-201ENST00000359025 275 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 RPS16P5-201ENST00000406501 404 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC7.07□□□□□ -1.28
ABCA3Q99758 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.07□□□□□ -1.28
ABCA3Q99758 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.07□□□□□ -1.28
ABCA3Q99758 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.07□□□□□ -1.28
ABCA3Q99758 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ABCA3Q99758 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.07□□□□□ -1.28
ABCA3Q99758 OR7E128P-201ENST00000532736 1024 ntBASIC7.07□□□□□ -1.28
ABCA3Q99758 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.07□□□□□ -1.28
ABCA3Q99758 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.07□□□□□ -1.28
ABCA3Q99758 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ABCA3Q99758 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
ABCA3Q99758 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 AC068870.1-201ENST00000563737 2455 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.06□□□□□ -1.28
ABCA3Q99758 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ABCA3Q99758 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.06□□□□□ -1.28
ABCA3Q99758 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.06□□□□□ -1.28
ABCA3Q99758 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 AC004690.1-201ENST00000418216 328 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 RIMKLBP2-201ENST00000424737 654 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 AC034205.1-201ENST00000520621 638 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 AP006289.1-201ENST00000538089 277 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.06□□□□□ -1.28
ABCA3Q99758 AC105129.1-201ENST00000560250 297 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.06□□□□□ -1.28
ABCA3Q99758 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.06□□□□□ -1.28
ABCA3Q99758 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ABCA3Q99758 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.06□□□□□ -1.28
ABCA3Q99758 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms