Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP2Q96SN8 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP2Q96SN8 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP2Q96SN8 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP2Q96SN8 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP2Q96SN8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP2Q96SN8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP2Q96SN8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RN7SKP95-201ENST00000362860 303 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 PPIAP9-201ENST00000403866 498 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RN7SKP125-201ENST00000410481 302 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RPS27P18-201ENST00000431701 247 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 DNAJB5P1-201ENST00000454004 806 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RN7SL610P-201ENST00000463845 291 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RPL7P39-201ENST00000481157 744 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 SNRPCP2-201ENST00000504370 475 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC109464.1-201ENST00000511091 819 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC091912.1-201ENST00000511351 248 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 SCARNA16.4-201ENST00000516956 187 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AP000676.2-201ENST00000529711 301 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC118658.2-201ENST00000618697 459 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AL355834.1-201ENST00000556602 3965 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 RPL34P20-201ENST00000442771 351 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC116651.1-201ENST00000609724 556 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC244107.2-201ENST00000611773 76 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC073869.8-201ENST00000641806 335 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 SAMMSON-227ENST00000642114 1199 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC114947.2-201ENST00000565748 2125 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AL021877.2-201ENST00000624442 10684 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 AC003973.3-201ENST00000624863 2822 ntBASIC6.36□□□□□ -1.39
CDK5RAP2Q96SN8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 SNURFL-201ENST00000309296 343 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 SNORA67-201ENST00000384423 137 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 RN7SKP126-201ENST00000411143 300 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AC211486.3-201ENST00000412694 621 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AP000534.2-201ENST00000412729 568 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 EIF3KP3-201ENST00000514461 639 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 MIR4436B2-201ENST00000581415 91 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 MIR4436B1-201ENST00000583272 91 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AC087385.3-201ENST00000620477 187 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AL355488.2-201ENST00000609909 2850 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AC012213.2-201ENST00000562917 4597 ntBASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP2Q96SN8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 RN7SKP185-201ENST00000362813 326 ntBASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 RN7SKP145-201ENST00000363291 303 ntBASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 U3.10-201ENST00000364459 214 ntBASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 AC104634.1-201ENST00000452720 462 ntBASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 HIGD1AP8-201ENST00000453927 274 ntBASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 snoU13.29-201ENST00000459370 104 ntBASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 AC115223.1-201ENST00000466377 870 ntBASIC6.34□□□□□ -1.39
CDK5RAP2Q96SN8 AP001804.1-201ENST00000526868 919 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms