Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 OR1L6-202ENST00000373684 1044 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 NAP1L4P2-201ENST00000425958 899 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC017019.1-201ENST00000426129 261 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 RPL19P16-201ENST00000433839 588 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 PNKDP1-201ENST00000435914 430 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AMYP1-201ENST00000440059 1023 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 ATP5LP2-201ENST00000440646 311 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC094085.1-201ENST00000468914 584 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 HMGN1P9-201ENST00000515212 298 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 CDC42P3-201ENST00000518493 633 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 MTCYBP13-201ENST00000578634 1093 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 RN7SL753P-201ENST00000581238 290 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 FAM27E4-201ENST00000605259 342 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC244517.3-201ENST00000616254 1235 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC073869.8-201ENST00000641806 335 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC58Q96CX6 AC073136.1-201ENST00000449426 2884 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 CASC19-238ENST00000641523 1558 ntBASIC5.25□□□□□ -1.57
LRRC58Q96CX6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 AC007842.1-201ENST00000597336 2039 ntBASIC5.24□□□□□ -1.57
LRRC58Q96CX6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 NPM1P38-201ENST00000403835 865 ntBASIC5.24□□□□□ -1.57
LRRC58Q96CX6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 MORF4L2P1-201ENST00000503761 858 ntBASIC5.24□□□□□ -1.57
LRRC58Q96CX6 ENPP7P11-201ENST00000505915 627 ntBASIC5.24□□□□□ -1.57
LRRC58Q96CX6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 GTF2IP11-201ENST00000526931 420 ntBASIC5.24□□□□□ -1.57
LRRC58Q96CX6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 FAM72A-208ENST00000607379 1139 ntBASIC5.24□□□□□ -1.57
LRRC58Q96CX6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 AL034549.2-201ENST00000618285 3373 ntBASIC5.24□□□□□ -1.57
LRRC58Q96CX6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC58Q96CX6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 AL031595.2-201ENST00000624215 19071 ntBASIC5.23□□□□□ -1.57
LRRC58Q96CX6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 OR9K1P-201ENST00000326513 941 ntBASIC5.23□□□□□ -1.57
LRRC58Q96CX6 RNA5SP435-201ENST00000364044 108 ntBASIC5.23□□□□□ -1.57
LRRC58Q96CX6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 RNU6-233P-201ENST00000410845 141 ntBASIC5.23□□□□□ -1.57
LRRC58Q96CX6 COX5BP7-201ENST00000414780 274 ntBASIC5.23□□□□□ -1.57
LRRC58Q96CX6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRC58Q96CX6 DNAJA1P5-201ENST00000440278 943 ntBASIC5.23□□□□□ -1.57
LRRC58Q96CX6 TCEA1P3-201ENST00000443005 880 ntBASIC5.23□□□□□ -1.57
LRRC58Q96CX6 CST12P-201ENST00000457644 362 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms