Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AL359922.2-201ENST00000581788 3017 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC007012.2-201ENST00000623206 1676 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 Y_RNA.554-201ENST00000384672 102 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 MTCO3P31-201ENST00000405526 789 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 UBTFL3-201ENST00000418934 1024 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 MTCO3P18-201ENST00000440206 761 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 GAPDHP37-201ENST00000442317 968 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 HMGB3P6-201ENST00000444896 598 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AP000852.1-201ENST00000472460 573 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC015524.1-201ENST00000491585 472 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 NDUFA5P12-201ENST00000503796 343 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC091874.2-201ENST00000505889 720 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 SNORA20.3-201ENST00000516880 132 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC245052.7-201ENST00000601161 359 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC128687.1-201ENST00000605304 619 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC068726.1-201ENST00000610993 341 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC004223.4-201ENST00000612426 332 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC131009.3-201ENST00000621809 287 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 AC009237.3-203ENST00000442128 3551 ntBASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.9□□□□□ -1.14
NEDD1Q8NHV4 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
NEDD1Q8NHV4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.9□□□□□ -1.15
NEDD1Q8NHV4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.9□□□□□ -1.15
NEDD1Q8NHV4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NEDD1Q8NHV4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
NEDD1Q8NHV4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NEDD1Q8NHV4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 ELF2P3-201ENST00000445099 1506 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC093278.2-201ENST00000564956 2485 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC018765.1-201ENST00000623357 3446 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 RPL24P4-201ENST00000326586 421 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 RNA5SP85-201ENST00000365378 119 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 VTA1P1-201ENST00000414044 866 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 RPL23AP85-201ENST00000421838 433 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 FABP7P1-201ENST00000424004 391 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms