Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC019322.1-201ENST00000571869 389 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AL022394.1-201ENST00000606979 292 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 MIR6780B-201ENST00000610307 79 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC006840.1-201ENST00000623069 542 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 GAPDHP24-201ENST00000328713 983 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RNU1-150P-201ENST00000362491 162 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RNA5SP30-201ENST00000365552 115 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RNA5SP296-201ENST00000410523 111 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 NANOGP9-201ENST00000439890 892 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 NXT1P1-201ENST00000458481 316 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 SNORD125-201ENST00000459538 96 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RPSAP51-201ENST00000497462 645 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 LSM3P4-201ENST00000502948 309 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AC122718.2-201ENST00000505325 591 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RFPL4AP3-201ENST00000515267 345 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 FTH1P11-201ENST00000517577 551 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AC009852.2-201ENST00000567898 485 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AL359091.2-201ENST00000609303 556 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 AL034546.1-201ENST00000623740 3693 ntBASIC5.36□□□□□ -1.55
CLHC1Q8NHS4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 MRE11P1-201ENST00000464884 2127 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 IFIT1P1-201ENST00000400497 1449 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 NEPNP-201ENST00000404786 1371 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 SNORA64.1-201ENST00000362600 132 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC004386.1-201ENST00000393214 761 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 MIR1203-201ENST00000408812 85 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AL356968.2-201ENST00000412769 1257 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AK4P4-201ENST00000419465 646 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 NENFP1-201ENST00000419476 466 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 PTP4A1P1-201ENST00000420539 515 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC069154.1-201ENST00000432914 542 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 HMGB3P24-201ENST00000433260 622 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 ACA64.1-201ENST00000459171 127 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 PMS2P3-207ENST00000529061 717 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC026826.3-201ENST00000561747 158 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AC015802.2-201ENST00000589690 189 ntBASIC5.35□□□□□ -1.55
CLHC1Q8NHS4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms