Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 MFSD4BP1-201ENST00000513330 1552 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 USP24P1-201ENST00000433802 779 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RPS3AP38-201ENST00000435889 763 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AC100832.1-201ENST00000471945 383 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RPL7P39-201ENST00000481157 744 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 DUTP1-201ENST00000493631 470 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RNU6-941P-201ENST00000516346 108 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 PRUNEP1-201ENST00000425846 705 ntBASIC1.71□□□□□ -2.13
SYNE1Q8NF91 RPL7P6-201ENST00000480903 738 ntBASIC1.71□□□□□ -2.13
SYNE1Q8NF91 AC093890.1-201ENST00000502554 540 ntBASIC1.71□□□□□ -2.13
SYNE1Q8NF91 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC1.71□□□□□ -2.13
SYNE1Q8NF91 OR13C1P-202ENST00000641378 2919 ntBASIC1.71□□□□□ -2.13
SYNE1Q8NF91 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 SNORA51.8-201ENST00000384234 132 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 PFN1P6-201ENST00000476786 399 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 RPEP1-201ENST00000504507 658 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 OR51A1P-201ENST00000511110 946 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 OR4A42P-201ENST00000531397 938 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 MAPK10-263ENST00000641052 4307 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 OR52B5P-201ENST00000435337 951 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AL451136.1-201ENST00000435399 325 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AC011742.2-201ENST00000443818 352 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 RN7SL547P-201ENST00000490793 290 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 HIGD1AP14-201ENST00000507617 282 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 IGLV2-28-201ENST00000520681 304 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AC005840.5-201ENST00000619166 599 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 OR52B5P-202ENST00000641118 1110 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 PARP4P1-201ENST00000435945 2337 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 KYNUP3-201ENST00000574386 1341 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 MAPK10-349ENST00000641767 3661 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AC016583.1-201ENST00000624221 2431 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 OR2W4P-201ENST00000406496 926 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 OR6E1P-201ENST00000414424 923 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 NME1P1-201ENST00000420914 382 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC1.71□□□□□ -2.14
SYNE1Q8NF91 AL603882.1-201ENST00000463059 681 ntBASIC1.71□□□□□ -2.14
SYNE1Q8NF91 SIAH1P1-201ENST00000479411 923 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms