Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC012078.1-201ENST00000405035 1646 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 MTND4P10-201ENST00000446199 1363 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC005332.9-201ENST00000620266 2921 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RNU6-623P-201ENST00000363143 105 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 Y_RNA.472-201ENST00000384322 102 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RPL5P20-201ENST00000403848 896 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 FCF1P5-201ENST00000406490 482 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RNU6-648P-201ENST00000410190 107 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 Y_RNA.599-201ENST00000410489 109 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RNU4-72P-201ENST00000410754 173 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 GLUD1P9-201ENST00000420997 1173 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC090018.1-201ENST00000434369 367 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL645939.3-201ENST00000435408 225 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 EXTL2P1-201ENST00000446218 416 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 ELOCP30-201ENST00000447108 299 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 MTND4LP3-201ENST00000468320 276 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RPS4XP6-201ENST00000477670 797 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC074386.1-206ENST00000487102 761 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RNU6-1334P-201ENST00000516032 105 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 OR9G2P-201ENST00000533326 880 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC084824.1-201ENST00000550917 1005 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RN7SL208P-201ENST00000577964 296 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC024267.2-201ENST00000582737 417 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC005726.4-201ENST00000582858 458 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 RN7SL622P-201ENST00000585292 275 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC005479.3-201ENST00000602790 431 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC067838.1-201ENST00000606064 577 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 TUSC7.1-201ENST00000610969 165 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC244100.4-201ENST00000617747 388 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC010975.3-201ENST00000618727 978 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL603755.1-201ENST00000619504 163 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC068213.1-201ENST00000625124 226 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 OR8G3P-202ENST00000641572 1255 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL137058.3-201ENST00000624531 3099 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPEB3Q8NE35 AL662795.2-201ENST00000624252 3706 ntBASIC5.7□□□□□ -1.5
CPEB3Q8NE35 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 CDY11P-201ENST00000447168 1651 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms