Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MED28P3-201ENST00000444288 531 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL445466.1-201ENST00000448432 357 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 RSU1P1-201ENST00000453416 441 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LDHBP2-201ENST00000456969 1005 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 RPL12P24-201ENST00000474907 486 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 RN7SKP35-201ENST00000517210 151 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC008627.1-201ENST00000517511 1704 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC009852.2-201ENST00000567898 485 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AP005119.1-201ENST00000580956 292 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 MIR4433B-201ENST00000581329 102 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 ABI1P1-201ENST00000603375 1120 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC006363.1-201ENST00000603806 463 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL049840.6-201ENST00000604583 345 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC097504.2-201ENST00000608088 454 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 FAM27E2-201ENST00000619668 403 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC097520.1-201ENST00000624435 385 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AC119674.1-220ENST00000641502 1048 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 Z95114.1-201ENST00000624264 14574 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL354854.1-201ENST00000455940 1363 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL022311.1-201ENST00000623726 19416 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 RPS4XP5-201ENST00000419038 768 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC017019.1-201ENST00000426129 261 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 MTATP6P17-201ENST00000431030 672 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC073072.2-201ENST00000447425 348 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 FRG2FP-204ENST00000453982 852 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 EIF2S2P5-201ENST00000457635 968 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC079080.1-201ENST00000479841 822 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC108729.1-201ENST00000487812 947 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL158068.1-201ENST00000506116 616 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 BCAS2P1-201ENST00000528022 632 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AP004609.2-201ENST00000532177 190 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC106785.3-201ENST00000564064 847 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC090826.1-203ENST00000569235 490 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 VN1R81P-201ENST00000602085 372 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC124916.2-201ENST00000604416 224 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL021918.2-201ENST00000613415 194 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC026367.3-201ENST00000619032 590 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC109809.1-201ENST00000619665 545 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC091046.2-201ENST00000620775 665 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AC002525.1-201ENST00000624392 1622 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms