Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNA5SP183-201ENST00000362452 119 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 AC096775.1-201ENST00000437724 448 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 RPS21P4-201ENST00000487122 248 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 ST13P12-201ENST00000508958 1094 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 MTND5P21-201ENST00000531961 522 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 AL136520.1-202ENST00000555494 763 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 AL049779.3-201ENST00000557141 606 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 AC007346.2-201ENST00000564816 892 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 AL391834.1-201ENST00000609609 560 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 AL121612.2-201ENST00000612261 482 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 AC068870.2-201ENST00000620635 389 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 AC009039.2-201ENST00000624524 529 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 PWAR1-201ENST00000624188 2414 ntBASIC7.08□□□□□ -1.28
SYNE4Q8N205 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 MIR550A3-201ENST00000390735 95 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 GAPDHP42-201ENST00000406848 981 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 RBMY2KP-201ENST00000418221 992 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL158053.1-201ENST00000441503 453 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL445687.2-201ENST00000458156 728 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 RPL35AP28-201ENST00000459730 331 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 RPL7AP6-201ENST00000477943 801 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 RPSAP50-201ENST00000481955 852 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 UBE2V1P12-201ENST00000503954 474 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC078899.1-201ENST00000521432 1185 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC126615.2-201ENST00000553003 515 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL049779.2-201ENST00000553847 315 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC098483.2-201ENST00000603158 454 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL683813.2-201ENST00000605245 502 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL139407.1-201ENST00000613826 1175 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL118522.2-201ENST00000616045 615 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 AC022960.3-201ENST00000619794 441 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 AL117339.4-201ENST00000608335 7063 ntBASIC7.07□□□□□ -1.28
SYNE4Q8N205 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE4Q8N205 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE4Q8N205 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SYNE4Q8N205 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SYNE4Q8N205 AC137056.2-201ENST00000624055 1958 ntBASIC7.06□□□□□ -1.28
SYNE4Q8N205 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.06□□□□□ -1.28
SYNE4Q8N205 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.06□□□□□ -1.28
SYNE4Q8N205 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SYNE4Q8N205 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SYNE4Q8N205 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
SYNE4Q8N205 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SYNE4Q8N205 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.06□□□□□ -1.28
SYNE4Q8N205 BX119904.3-201ENST00000428194 957 ntBASIC7.06□□□□□ -1.28
SYNE4Q8N205 FABP7P2-201ENST00000429946 379 ntBASIC7.06□□□□□ -1.28
SYNE4Q8N205 RPL17P35-201ENST00000432217 549 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms