Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC090948.2-201ENST00000607363 564 ntBASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 STMN1P1-201ENST00000617809 440 ntBASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 AC245505.2-201ENST00000553572 3055 ntBASIC8.14□□□□□ -1.11
SCUBE3Q8IX30 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 LARP1BP1-201ENST00000506036 1359 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RNU6-543P-201ENST00000362576 108 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RNU6-723P-201ENST00000383973 107 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RNU6-474P-201ENST00000384243 107 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RNU6-1263P-201ENST00000384601 106 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RNU6-1105P-201ENST00000384774 107 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AL590143.1-201ENST00000405071 138 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RNU2-39P-201ENST00000410604 198 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 GTF2IP20-201ENST00000431663 360 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 OR51P1P-201ENST00000447547 942 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RANP1-206ENST00000455094 651 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 Y_RNA.632-201ENST00000459189 102 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RN7SL36P-201ENST00000469345 276 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RN7SL861P-201ENST00000473793 285 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RPL7P38-201ENST00000488396 739 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC113352.1-201ENST00000513196 666 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC008429.2-201ENST00000523057 864 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC019322.1-201ENST00000571869 389 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 H3F3BP2-201ENST00000583907 357 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AL596327.1-201ENST00000603629 213 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AL109918.2-201ENST00000605188 279 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 RMST_3.1-201ENST00000611651 109 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AC110994.2-201ENST00000635481 492 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 TPTEP1-208ENST00000636884 213 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 BRAFP1-201ENST00000445336 2703 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 OR7E11P-202ENST00000642027 1491 ntBASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCUBE3Q8IX30 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC126773.4-201ENST00000612545 3043 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 MIR106B-201ENST00000385301 82 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 NHP2P2-201ENST00000396362 460 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms